Difference between revisions of "SEDOHEPTULOSE-BISPHOSPHATASE-RXN"
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(Created page with "Category:reaction == Reaction PHENYLALANINE--TRNA-LIGASE-RXN == * common-name: ** phenylalanine-trna ligase ** phenylalanine—trna ligase * ec-number: ** [http://enzy...") |
(Created page with "Category:reaction == Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN == * common-name: ** sedoheptulose bisphosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.37 ec-3...") |
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(2 intermediate revisions by 2 users not shown) | |||
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN == |
* common-name: | * common-name: | ||
− | ** | + | ** sedoheptulose bisphosphatase |
− | |||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.1.3.37 ec-3.1.3.37] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[D-SEDOHEPTULOSE-1-7-P2]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_15378]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_12060]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_12063]] |
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_12062]] |
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_15379]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_12061]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_19321]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
</div> | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * | + | * [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: |
− | ** ''' | + | ** '''12''' reactions found over '''13''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | * | + | * METANETX-RXN : MNXR104279 |
− | * | + | * RHEA: |
− | {{#set: common-name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17462 17462] |
− | {{#set: ec-number=ec- | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01845 R01845] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P23014 P23014] | ||
+ | ** [http://www.uniprot.org/uniprot/P46285 P46285] | ||
+ | ** [http://www.uniprot.org/uniprot/P46283 P46283] | ||
+ | ** [http://www.uniprot.org/uniprot/P46284 P46284] | ||
+ | ** [http://www.uniprot.org/uniprot/O23780 O23780] | ||
+ | ** [http://www.uniprot.org/uniprot/O20252 O20252] | ||
+ | {{#set: common-name=sedoheptulose bisphosphatase}} | ||
+ | {{#set: ec-number=ec-3.1.3.37}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=7}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=ectocarpus_subulatus}} | + | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} |
Latest revision as of 19:38, 17 March 2021
Contents
Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN
- common-name:
- sedoheptulose bisphosphatase
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 D-SEDOHEPTULOSE-1-7-P2[c] + 1 WATER[c] => 1 D-SEDOHEPTULOSE-7-P[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_15378
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_12060
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_12063
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_12062
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_15379
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_12061
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_19321
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- CALVIN-PWY, Calvin-Benson-Bassham cycle:
- 12 reactions found over 13 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR104279
- RHEA:
- LIGAND-RXN:
- UNIPROT: