Difference between revisions of "SEDOHEPTULOSE-BISPHOSPHATASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-1226 == * common-name: ** galactolipid galactosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.184 ec-2.4.1.184] * direc...")
(Created page with "Category:reaction == Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN == * common-name: ** sedoheptulose bisphosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.37 ec-3...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-1226 ==
+
== Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN ==
 
* common-name:
 
* common-name:
−
** galactolipid galactosyltransferase
+
** sedoheptulose bisphosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.184 ec-2.4.1.184]
+
** [http://enzyme.expasy.org/EC/3.1.3.37 ec-3.1.3.37]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[D-Galactosyl-12-diacyl-glycerols]][c] '''=>''' 1 [[CPD-10363]][c] '''+''' 1 [[DIACYLGLYCEROL]][c]
+
* 1 [[D-SEDOHEPTULOSE-1-7-P2]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[E_subulatus_14739]]
+
* Gene: [[E_subulatus_15378]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_10302]]
+
* Gene: [[E_subulatus_12060]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_14738]]
+
* Gene: [[E_subulatus_12063]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_01840]]
+
* Gene: [[E_subulatus_12062]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_17738]]
+
* Gene: [[E_subulatus_15379]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_01839]]
+
* Gene: [[E_subulatus_12061]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_18293]]
+
* Gene: [[E_subulatus_19321]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[E_subulatus_18292]]
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_09152]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_09153]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-401]], galactolipid biosynthesis I:
+
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''12''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR104279
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17462 17462]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04472 R04472]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01845 R01845]
−
* METANETX-RXN : MNXR108909
+
* UNIPROT:
−
* RHEA:
+
** [http://www.uniprot.org/uniprot/P23014 P23014]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15922 15922]
+
** [http://www.uniprot.org/uniprot/P46285 P46285]
−
{{#set: common-name=galactolipid galactosyltransferase}}
+
** [http://www.uniprot.org/uniprot/P46283 P46283]
−
{{#set: ec-number=ec-2.4.1.184}}
+
** [http://www.uniprot.org/uniprot/P46284 P46284]
 +
** [http://www.uniprot.org/uniprot/O23780 O23780]
 +
** [http://www.uniprot.org/uniprot/O20252 O20252]
 +
{{#set: common-name=sedoheptulose bisphosphatase}}
 +
{{#set: ec-number=ec-3.1.3.37}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=10}}
+
{{#set: nb gene associated=7}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN

  • common-name:
    • sedoheptulose bisphosphatase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • CALVIN-PWY, Calvin-Benson-Bassham cycle:
    • 12 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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