Difference between revisions of "SPERMIDINESYN-RXN"

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(Created page with "Category:reaction == Reaction RXN-7101 == * direction: ** left-to-right == Reaction formula == * 2 BCCP-biotin-monomers[c] '''=>''' 1 BCCP-dimers[c] == Gene(s) ass...")
(Created page with "Category:reaction == Reaction SPERMIDINESYN-RXN == * common-name: ** spermidine synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.16 ec-2.5.1.16] * direction: **...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7101 ==
+
== Reaction SPERMIDINESYN-RXN ==
 +
* common-name:
 +
** spermidine synthase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.5.1.16 ec-2.5.1.16]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[BCCP-biotin-monomers]][c] '''=>''' 1 [[BCCP-dimers]][c]
+
* 1 [[PUTRESCINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''<=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SPERMIDINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_06330]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_10711]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_10709]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_10710]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_10712]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_18229]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1264]], biotin-carboxyl carrier protein assembly:
+
* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR121897
+
* METANETX-RXN : MNXR95860
−
{{#set: direction=left-to-right}}
+
* RHEA:
−
{{#set: nb gene associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12724 12724]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01920 R01920]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P19623 P19623]
 +
** [http://www.uniprot.org/uniprot/Q57761 Q57761]
 +
** [http://www.uniprot.org/uniprot/Q12074 Q12074]
 +
** [http://www.uniprot.org/uniprot/Q12455 Q12455]
 +
** [http://www.uniprot.org/uniprot/P09158 P09158]
 +
** [http://www.uniprot.org/uniprot/O48660 O48660]
 +
{{#set: common-name=spermidine synthase}}
 +
{{#set: ec-number=ec-2.5.1.16}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=6}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction comment=annotation}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction SPERMIDINESYN-RXN

  • common-name:
    • spermidine synthase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • BSUBPOLYAMSYN-PWY, spermidine biosynthesis I:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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