Difference between revisions of "RXN490-3641"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 5.3.1.23-RXN == * common-name: ** 5-methylthioribose-1-phosphate isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.3.1.23 ec-5.3.1.23]...")
(Created page with "Category:reaction == Reaction RXN490-3641 == * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.57 ec-1.14.11.57] * direction: ** left-to-right * synonymous: ** prolyl h...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 5.3.1.23-RXN ==
+
== Reaction RXN490-3641 ==
−
* common-name:
 
−
** 5-methylthioribose-1-phosphate isomerase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.3.1.23 ec-5.3.1.23]
+
** [http://enzyme.expasy.org/EC/1.14.11.57 ec-1.14.11.57]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* synonymous:
 +
** prolyl hydroxylase
 +
** proline hydroxylase
 +
** prolyl 4-hydroxylase
 +
** protocollagen hydroxylase
 +
** proline,2-oxoglutarate 4-dioxygenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-444]][c] '''=>''' 1 [[CPD-1063]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[4-HYDROXY-L-PROLINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_15475]]
−
* Gene: [[E_subulatus_01605]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16207]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_01607]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_01609]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_01606]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_03023]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_01608]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_03024]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-4361]], S-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation I:
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7174]], S-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II:
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR101759
+
* METANETX-RXN : MNXR103186
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19990 19990]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=51509 51509]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04420 R04420]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01252 R01252]
−
{{#set: common-name=5-methylthioribose-1-phosphate isomerase}}
+
{{#set: ec-number=ec-1.14.11.57}}
−
{{#set: ec-number=ec-5.3.1.23}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=8}}
+
{{#set: synonymous=prolyl hydroxylase|proline hydroxylase|prolyl 4-hydroxylase|protocollagen hydroxylase|proline,2-oxoglutarate 4-dioxygenase}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN490-3641

  • ec-number:
  • direction:
    • left-to-right
  • synonymous:
    • prolyl hydroxylase
    • proline hydroxylase
    • prolyl 4-hydroxylase
    • protocollagen hydroxylase
    • proline,2-oxoglutarate 4-dioxygenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR103186
  • RHEA:
  • LIGAND-RXN:





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=RXN490-3641&oldid=50946"