Difference between revisions of "UDPGLUCEPIM-RXN"
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(Created page with "Category:reaction == Reaction RXN-12539 == * direction: ** left-to-right == Reaction formula == * 1 CPD-12377[c] '''+''' 1 CPD-479[c] '''=>''' 2 CARBON-DIOXIDE...") |
(Created page with "Category:reaction == Reaction UDPGLUCEPIM-RXN == * common-name: ** udp-glucose 4-epimerase * ec-number: ** [http://enzyme.expasy.org/EC/5.1.3.2 ec-5.1.3.2] * direction: **...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction UDPGLUCEPIM-RXN == |
+ | * common-name: | ||
+ | ** udp-glucose 4-epimerase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/5.1.3.2 ec-5.1.3.2] | ||
* direction: | * direction: | ||
− | ** | + | ** reversible |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[CPD- | + | * 1 [[CPD-12575]][c] '''<=>''' 1 [[CPD-14553]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * Gene: [[E_subulatus_15511]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[E_subulatus_05406]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_22244]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[E_subulatus_22246]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_22245]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_17872]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-3821]], D-galactose detoxification: |
− | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
+ | * [[PWY-7328]], superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: | ||
+ | ** '''5''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6527]], stachyose degradation: | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6397]], mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: | ||
+ | ** '''1''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[COLANSYN-PWY]], colanic acid building blocks biosynthesis: | ||
+ | ** '''6''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-7344]], UDP-α-D-galactose biosynthesis: | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY66-422]]: | ||
+ | ** '''5''' reactions found over '''n.a''' reactions in the full pathway | ||
+ | * [[PWY-6317]], D-galactose degradation I (Leloir pathway): | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | * METANETX-RXN : | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: | + | * METANETX-RXN : MNXR143428 |
− | {{#set: nb gene associated= | + | * RHEA: |
− | {{#set: nb pathway associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22171 22171] |
− | {{#set: reconstruction category= | + | * LIGAND-RXN: |
− | {{#set: reconstruction tool= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00291 R00291] |
− | {{#set: reconstruction comment= | + | * UNIPROT: |
− | {{#set: reconstruction source= | + | ** [http://www.uniprot.org/uniprot/P35673 P35673] |
+ | ** [http://www.uniprot.org/uniprot/P22715 P22715] | ||
+ | ** [http://www.uniprot.org/uniprot/P21977 P21977] | ||
+ | ** [http://www.uniprot.org/uniprot/P24325 P24325] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CE66 Q9CE66] | ||
+ | ** [http://www.uniprot.org/uniprot/Q57664 Q57664] | ||
+ | ** [http://www.uniprot.org/uniprot/P55180 P55180] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PNG3 Q9PNG3] | ||
+ | ** [http://www.uniprot.org/uniprot/P56997 P56997] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59083 Q59083] | ||
+ | ** [http://www.uniprot.org/uniprot/Q44016 Q44016] | ||
+ | ** [http://www.uniprot.org/uniprot/Q45291 Q45291] | ||
+ | ** [http://www.uniprot.org/uniprot/P96995 P96995] | ||
+ | ** [http://www.uniprot.org/uniprot/P45602 P45602] | ||
+ | ** [http://www.uniprot.org/uniprot/P18645 P18645] | ||
+ | ** [http://www.uniprot.org/uniprot/P26503 P26503] | ||
+ | ** [http://www.uniprot.org/uniprot/P40801 P40801] | ||
+ | ** [http://www.uniprot.org/uniprot/Q05026 Q05026] | ||
+ | ** [http://www.uniprot.org/uniprot/P56985 P56985] | ||
+ | ** [http://www.uniprot.org/uniprot/Q51148 Q51148] | ||
+ | ** [http://www.uniprot.org/uniprot/Q56093 Q56093] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42605 Q42605] | ||
+ | ** [http://www.uniprot.org/uniprot/Q60109 Q60109] | ||
+ | ** [http://www.uniprot.org/uniprot/P72903 P72903] | ||
+ | ** [http://www.uniprot.org/uniprot/P72915 P72915] | ||
+ | ** [http://www.uniprot.org/uniprot/O66256 O66256] | ||
+ | ** [http://www.uniprot.org/uniprot/O64749 O64749] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9SN58 Q9SN58] | ||
+ | ** [http://www.uniprot.org/uniprot/Q8VZ26 Q8VZ26] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43070 Q43070] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9T0A7 Q9T0A7] | ||
+ | ** [http://www.uniprot.org/uniprot/O65780 O65780] | ||
+ | ** [http://www.uniprot.org/uniprot/O65781 O65781] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RMC0 Q9RMC0] | ||
+ | ** [http://www.uniprot.org/uniprot/P04397 P04397] | ||
+ | ** [http://www.uniprot.org/uniprot/P09147 P09147] | ||
+ | ** [http://www.uniprot.org/uniprot/P13226 P13226] | ||
+ | ** [http://www.uniprot.org/uniprot/P09609 P09609] | ||
+ | </div> | ||
+ | {{#set: common-name=udp-glucose 4-epimerase}} | ||
+ | {{#set: ec-number=ec-5.1.3.2}} | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: nb gene associated=6}} | ||
+ | {{#set: nb pathway associated=8}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} |
Latest revision as of 19:38, 17 March 2021
Contents
Reaction UDPGLUCEPIM-RXN
- common-name:
- udp-glucose 4-epimerase
- ec-number:
- direction:
- reversible
Reaction formula
Gene(s) associated with this reaction
- Gene: E_subulatus_15511
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: E_subulatus_05406
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_22244
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: E_subulatus_22246
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_22245
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_17872
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-3821, D-galactose detoxification:
- 3 reactions found over 3 reactions in the full pathway
- PWY-7328, superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis:
- 5 reactions found over 2 reactions in the full pathway
- PWY-6527, stachyose degradation:
- 6 reactions found over 7 reactions in the full pathway
- PWY-6397, mycolyl-arabinogalactan-peptidoglycan complex biosynthesis:
- 1 reactions found over 18 reactions in the full pathway
- COLANSYN-PWY, colanic acid building blocks biosynthesis:
- 6 reactions found over 1 reactions in the full pathway
- PWY-7344, UDP-α-D-galactose biosynthesis:
- 1 reactions found over 1 reactions in the full pathway
- PWY66-422:
- 5 reactions found over n.a reactions in the full pathway
- PWY-6317, D-galactose degradation I (Leloir pathway):
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR143428
- RHEA:
- LIGAND-RXN:
- UNIPROT: