Difference between revisions of "RXN-17790"

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(Created page with "Category:reaction == Reaction RXN0-5398 == * common-name: ** pseudouridine-5'-phosphate glycosidase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.70 ec-4.2.1.70] * di...")
(Created page with "Category:reaction == Reaction RXN-17790 == * common-name: ** 3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35] * direction...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-5398 ==
+
== Reaction RXN-17790 ==
 
* common-name:
 
* common-name:
−
** pseudouridine-5'-phosphate glycosidase
+
** 3-hydroxyacyl-coa dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.70 ec-4.2.1.70]
+
** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-15317]][c] '''+''' 1 [[URACIL]][c] '''<=>''' 1 [[PSEUDOURIDINE-5-P]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD-19155]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-19158]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_22423]]
+
* Gene: [[E_subulatus_04640]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_22422]]
+
* Gene: [[E_subulatus_02116]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6019]], pseudouridine degradation:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR141222
+
* METANETX-RXN : MNXR121165
−
* RHEA:
+
{{#set: common-name=3-hydroxyacyl-coa dehydrogenase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18340 18340]
+
{{#set: ec-number=ec-1.1.1.35}}
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q9JWF1 Q9JWF1]
 
−
** [http://www.uniprot.org/uniprot/Q9JTX5 Q9JTX5]
 
−
** [http://www.uniprot.org/uniprot/Q9PPJ9 Q9PPJ9]
 
−
** [http://www.uniprot.org/uniprot/Q9CGH0 Q9CGH0]
 
−
** [http://www.uniprot.org/uniprot/Q9CI80 Q9CI80]
 
−
** [http://www.uniprot.org/uniprot/Q9JX44 Q9JX44]
 
−
** [http://www.uniprot.org/uniprot/Q9V1A5 Q9V1A5]
 
−
** [http://www.uniprot.org/uniprot/Q9PP96 Q9PP96]
 
−
** [http://www.uniprot.org/uniprot/Q9PN18 Q9PN18]
 
−
** [http://www.uniprot.org/uniprot/Q9PJ89 Q9PJ89]
 
−
** [http://www.uniprot.org/uniprot/Q9PNJ2 Q9PNJ2]
 
−
** [http://www.uniprot.org/uniprot/Q9PLW9 Q9PLW9]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01055 R01055]
 
−
{{#set: common-name=pseudouridine-5'-phosphate glycosidase}}
 
−
{{#set: ec-number=ec-4.2.1.70}}
 
−
{{#set: direction=reversible}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN-17790

  • common-name:
    • 3-hydroxyacyl-coa dehydrogenase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR121165





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