Difference between revisions of "RXN-5470"

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(Created page with "Category:reaction == Reaction 3-OXOACYL-ACP-SYNTH-BASE-RXN == * common-name: ** acetoacetyl-[acp] synthase ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction RXN-5470 == * direction: ** left-to-right * ec_number: ** ec-2.4.1.267 == Reaction formula == * 1 CPD-166[c] '''+''' 1 CPD-5168[c] ''...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3-OXOACYL-ACP-SYNTH-BASE-RXN ==
+
== Reaction RXN-5470 ==
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* common-name:
 
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** acetoacetyl-[acp] synthase
 
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** 3-oxoacyl-[acyl-carrier-protein] synthase
 
−
* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
 
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** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
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** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
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** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* ec_number:
 +
** ec-2.4.1.267
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ACETYL-ACP]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[Acetoacetyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[CPD-166]][c] '''+''' 1 [[CPD-5168]][c] '''=>''' 1 [[CPD-5169]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* Gene: [[E_subulatus_13005]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[E_subulatus_08948]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[E_subulatus_15037]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_22266]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_13006]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_22265]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_15038]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_13004]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic):
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** '''1''' reactions found over '''2''' reactions in the full pathway
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** '''19''' reactions found over '''19''' reactions in the full pathway
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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** '''5''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* DB : UNIPROT
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* METANETX-RXN : MNXR121815
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* ID : O34340
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* LIGAND-RXN:
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{{#set: common-name=acetoacetyl-[acp] synthase|3-oxoacyl-[acyl-carrier-protein] synthase}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06262 R06262]
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{{#set: ec-number=ec-2.3.1.179|ec-2.3.1.86|ec-2.3.1.85|ec-2.3.1.41}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30638 30638]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=8}}
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{{#set: ec_number=ec-2.4.1.267}}
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{{#set: nb pathway associated=4}}
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{{#set: nb gene associated=0}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
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{{#set: reconstruction comment=annotation}}
 +
{{#set: reconstruction source=esub_adding_annot_form}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN-5470

  • direction:
    • left-to-right
  • ec_number:
    • ec-2.4.1.267

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR121815
  • LIGAND-RXN:
  • RHEA:





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