Difference between revisions of "RXN-6423"

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(Created page with "Category:reaction == Reaction RXN-12490 == * common-name: ** (s)-3-hydroxydecanoyl-coa dehydrogenase ** 3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction RXN-6423 == * direction: ** reversible * ec_number: ** ec-2.6.1.82 == Reaction formula == * 1 4-AMINO-BUTYRALDEHYDE[c] '''<=>''' 1 CPD-...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-12490 ==
+
== Reaction RXN-6423 ==
* common-name:
 
** (s)-3-hydroxydecanoyl-coa dehydrogenase
 
** 3-hydroxyacyl-coa dehydrogenase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
 
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 +
* ec_number:
 +
** ec-2.6.1.82
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD0-2244]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD0-2123]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[4-AMINO-BUTYRALDEHYDE]][c] '''<=>''' 1 [[CPD-6124]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_04640]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_02116]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[PWY-6440]], spermine and spermidine degradation II:
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-2]], putrescine degradation IV:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* DB : RHEA
+
* METANETX-RXN : MNXR103470
* ID : 31188
+
* RHEA:
{{#set: common-name=(s)-3-hydroxydecanoyl-coa dehydrogenase|3-hydroxyacyl-coa dehydrogenase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22591 22591]
{{#set: ec-number=ec-1.1.1.35}}
+
* LIGAND-RXN:
{{#set: direction=left-to-right}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07408 R07408]
{{#set: nb gene associated=2}}
+
{{#set: direction=reversible}}
{{#set: nb pathway associated=1}}
+
{{#set: ec_number=ec-2.6.1.82}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: nb gene associated=0}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: nb pathway associated=2}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction tool=curation}}
 +
{{#set: reconstruction comment=annotation}}
 +
{{#set: reconstruction source=esub_adding_annot_form}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN-6423

  • direction:
    • reversible
  • ec_number:
    • ec-2.6.1.82

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6440, spermine and spermidine degradation II:
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-2, putrescine degradation IV:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR103470
  • RHEA:
  • LIGAND-RXN: