Difference between revisions of "RXN-9540"

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(Created page with "Category:reaction == Reaction GDP-6-DEOXY-D-TALOSE-4-DEHYDROGENASE-RXN == * common-name: ** gdp-4-keto-6-deoxy-d-mannose reductase * ec-number: ** [http://enzyme.expasy.or...")
 
(Created page with "Category:reaction == Reaction RXN-9540 == * common-name: ** 3-oxo-palmitoyl-[acyl-carrier protein] reductase ** (r)-3-hydroxypalmitoyl-[acp] reductase ** 3-oxoacyl-[acyl-c...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GDP-6-DEOXY-D-TALOSE-4-DEHYDROGENASE-RXN ==
+
== Reaction RXN-9540 ==
 
* common-name:
 
* common-name:
−
** gdp-4-keto-6-deoxy-d-mannose reductase
+
** 3-oxo-palmitoyl-[acyl-carrier protein] reductase
 +
** (r)-3-hydroxypalmitoyl-[acp] reductase
 +
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.187 ec-1.1.1.187]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
−
** [http://enzyme.expasy.org/EC/1.1.1.135 ec-1.1.1.135]
+
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-354]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
* 1 [[3-oxo-palmitoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-Hydroxypalmitoyl-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_07773]]
+
* Gene: [[E_subulatus_15266]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_19816]]
+
* Gene: [[E_subulatus_15038]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_07774]]
+
* Gene: [[E_subulatus_15037]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_01075]]
+
* Gene: [[E_subulatus_15265]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''30''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5971]], palmitate biosynthesis (type II fatty acid synthase):
 +
** '''30''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : RHEA
+
* METANETX-RXN : MNXR122852
−
* ID : 10727
+
{{#set: common-name=(r)-3-hydroxypalmitoyl-[acp] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)|3-oxo-palmitoyl-[acyl-carrier protein] reductase}}
−
{{#set: common-name=gdp-4-keto-6-deoxy-d-mannose reductase}}
+
{{#set: ec-number=ec-2.3.1.85|ec-1.1.1.100|ec-2.3.1.86}}
−
{{#set: ec-number=ec-1.1.1.187|ec-1.1.1.135}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=4}}
 
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN-9540

  • common-name:
    • 3-oxo-palmitoyl-[acyl-carrier protein] reductase
    • (r)-3-hydroxypalmitoyl-[acp] reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5994, palmitate biosynthesis (type I fatty acid synthase):
    • 30 reactions found over 31 reactions in the full pathway
  • PWY-5971, palmitate biosynthesis (type II fatty acid synthase):
    • 30 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122852
  • Property "Common-name" (as page type) with input value "(r)-3-hydroxypalmitoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase (nadph)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxo-palmitoyl-[acyl-carrier protein] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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