Difference between revisions of "RXN-10059"

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(Created page with "Category:reaction == Reaction URIDINEKIN-RXN == * common-name: ** uridine kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.48 ec-2.7.1.48] * direction: ** left-to...")
(Created page with "Category:reaction == Reaction RXN-10059 == * common-name: ** 3-oxo-cerotoyl-[acp] synthase ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [http://enzyme.expa...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction URIDINEKIN-RXN ==
+
== Reaction RXN-10059 ==
 
* common-name:
 
* common-name:
−
** uridine kinase
+
** 3-oxo-cerotoyl-[acp] synthase
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.48 ec-2.7.1.48]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[URIDINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UMP]][c]
+
* 1 [[Lignoceroyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-cerotoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_22526]]
+
* Gene: [[E_subulatus_22265]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_03631]]
+
* Gene: [[E_subulatus_13006]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_00789]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_19894]]
+
* Gene: [[E_subulatus_22266]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_19892]]
+
* Gene: [[E_subulatus_13004]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_19893]]
+
* Gene: [[E_subulatus_08948]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13005]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7193]], pyrimidine ribonucleosides salvage I:
+
* [[PWY-6113]], superpathway of mycolate biosynthesis:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''8''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWYG-321]], mycolate biosynthesis:
 +
** '''43''' reactions found over '''205''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR105162
+
* METANETX-RXN : MNXR116299
−
* RHEA:
+
{{#set: common-name=3-oxo-cerotoyl-[acp] synthase|3-oxoacyl-[acyl-carrier-protein] synthase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16826 16826]
+
{{#set: ec-number=ec-2.3.1.41}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00964 R00964]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P0A8F4 P0A8F4]
 
−
** [http://www.uniprot.org/uniprot/P47622 P47622]
 
−
** [http://www.uniprot.org/uniprot/Q9CF21 Q9CF21]
 
−
** [http://www.uniprot.org/uniprot/P44533 P44533]
 
−
** [http://www.uniprot.org/uniprot/P27515 P27515]
 
−
{{#set: common-name=uridine kinase}}
 
−
{{#set: ec-number=ec-2.7.1.48}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=6}}
 
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN-10059

  • common-name:
    • 3-oxo-cerotoyl-[acp] synthase
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6113, superpathway of mycolate biosynthesis:
    • 8 reactions found over 4 reactions in the full pathway
  • PWYG-321, mycolate biosynthesis:
    • 43 reactions found over 205 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR116299
  • Property "Common-name" (as page type) with input value "3-oxo-cerotoyl-[acp] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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