Difference between revisions of "ORNDECARBOX-RXN"

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(Created page with "Category:reaction == Reaction GLUC1PURIDYLTRANS-RXN == * common-name: ** utp—glucose-1-phosphate uridylyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.7...")
 
(Created page with "Category:reaction == Reaction ORNDECARBOX-RXN == * common-name: ** ornithine decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.17 ec-4.1.1.17] * direction:...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUC1PURIDYLTRANS-RXN ==
+
== Reaction ORNDECARBOX-RXN ==
 
* common-name:
 
* common-name:
−
** utp—glucose-1-phosphate uridylyltransferase
+
** ornithine decarboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.64 ec-2.7.7.64]
+
** [http://enzyme.expasy.org/EC/4.1.1.17 ec-4.1.1.17]
−
** [http://enzyme.expasy.org/EC/2.7.7.9 ec-2.7.7.9]
 
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLC-1-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UTP]][c] '''<=>''' 1 [[CPD-12575]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[L-ORNITHINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PUTRESCINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_20369]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_07648]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_12392]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_11661]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_11660]]
+
* Gene: [[E_subulatus_05377]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_12389]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_23646]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_12390]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_12391]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-46]], putrescine biosynthesis III:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[ORNDEG-PWY]], superpathway of ornithine degradation:
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-6305]], superpathway of putrescine biosynthesis:
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''n.a''' reactions in the full pathway
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7817]]:
 
−
** '''6''' reactions found over '''n.a''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* ID : P33696
+
* METANETX-RXN : MNXR102209
−
{{#set: common-name=utp&mdash;glucose-1-phosphate uridylyltransferase}}
+
* RHEA:
−
{{#set: ec-number=ec-2.7.7.64|ec-2.7.7.9}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22965 22965]
−
{{#set: direction=reversible}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=3}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00670 R00670]
−
{{#set: nb pathway associated=5}}
+
* UNIPROT:
−
{{#set: reconstruction category=annotation|orthology}}
+
** [http://www.uniprot.org/uniprot/P24169 P24169]
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
** [http://www.uniprot.org/uniprot/P27121 P27121]
 +
** [http://www.uniprot.org/uniprot/P27116 P27116]
 +
** [http://www.uniprot.org/uniprot/P27120 P27120]
 +
** [http://www.uniprot.org/uniprot/P43099 P43099]
 +
** [http://www.uniprot.org/uniprot/Q9X2I6 Q9X2I6]
 +
** [http://www.uniprot.org/uniprot/P08432 P08432]
 +
** [http://www.uniprot.org/uniprot/P27118 P27118]
 +
** [http://www.uniprot.org/uniprot/P11926 P11926]
 +
** [http://www.uniprot.org/uniprot/P14019 P14019]
 +
** [http://www.uniprot.org/uniprot/P00860 P00860]
 +
** [http://www.uniprot.org/uniprot/P09057 P09057]
 +
** [http://www.uniprot.org/uniprot/Q9TZZ6 Q9TZZ6]
 +
** [http://www.uniprot.org/uniprot/P44317 P44317]
 +
** [http://www.uniprot.org/uniprot/O66940 O66940]
 +
** [http://www.uniprot.org/uniprot/P27119 P27119]
 +
** [http://www.uniprot.org/uniprot/P49725 P49725]
 +
** [http://www.uniprot.org/uniprot/P50134 P50134]
 +
** [http://www.uniprot.org/uniprot/P93351 P93351]
 +
** [http://www.uniprot.org/uniprot/P93357 P93357]
 +
** [http://www.uniprot.org/uniprot/O15696 O15696]
 +
** [http://www.uniprot.org/uniprot/Q84527 Q84527]
 +
** [http://www.uniprot.org/uniprot/P41931 P41931]
 +
** [http://www.uniprot.org/uniprot/O69865 O69865]
 +
** [http://www.uniprot.org/uniprot/Q9UQW9 Q9UQW9]
 +
</div>
 +
{{#set: common-name=ornithine decarboxylase}}
 +
{{#set: ec-number=ec-4.1.1.17}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=7}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:39, 17 March 2021

Reaction ORNDECARBOX-RXN

  • common-name:
    • ornithine decarboxylase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-46, putrescine biosynthesis III:
    • 1 reactions found over 2 reactions in the full pathway
  • ORNDEG-PWY, superpathway of ornithine degradation:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6305, superpathway of putrescine biosynthesis:
    • 3 reactions found over n.a reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=ORNDECARBOX-RXN&oldid=51114"