Difference between revisions of "RXN-3142"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN0-5114 == * common-name: ** phosphoserine phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.3 ec-3.1.3.3] * direction: ** lef...")
(Created page with "Category:reaction == Reaction RXN-3142 == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.170 ec-2.3.1.170] * direction: ** left-to-right == Reaction formula == * 3 M...")
 
(2 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-5114 ==
+
== Reaction RXN-3142 ==
* common-name:
 
** phosphoserine phosphatase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.3.3 ec-3.1.3.3]
+
** [http://enzyme.expasy.org/EC/2.3.1.170 ec-2.3.1.170]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[3-P-SERINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[SER]][c]
+
* 3 [[MALONYL-COA]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 4 [[PROTON]][c] '''=>''' 3 [[CARBON-DIOXIDE]][c] '''+''' 4 [[CO-A]][c] '''+''' 1 [[CPD-3041]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_19169]]
+
* Gene: [[E_subulatus_17252]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[E_subulatus_19170]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis:
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* DB : RHEA
+
* METANETX-RXN : MNXR110355
* ID : 21208
+
* LIGAND-RXN:
{{#set: common-name=phosphoserine phosphatase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R06568 R06568]
{{#set: ec-number=ec-3.1.3.3}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10584 10584]
 +
{{#set: ec-number=ec-2.3.1.170}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:39, 17 March 2021

Reaction RXN-3142

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY1F-FLAVSYN, flavonoid biosynthesis:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR110355
  • LIGAND-RXN:
  • RHEA: