Difference between revisions of "RXN-13406"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-13729 == * common-name: ** phytosphingosine 1-phosphate aldolase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2.27 ec-4.1.2.27] * dir...")
(Created page with "Category:reaction == Reaction RXN-13406 == * direction: ** left-to-right * ec_number: ** ec-2.1.1.162 == Reaction formula == * 1 GLY[c] '''+''' 3 S-ADENOSYLMETHIONIN...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-13729 ==
+
== Reaction RXN-13406 ==
* common-name:
 
** phytosphingosine 1-phosphate aldolase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.1.2.27 ec-4.1.2.27]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* ec_number:
 +
** ec-2.1.1.162
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[PHTYOSPHINGOSINE-1-P]][c] '''=>''' 1 [[CPD-14766]][c] '''+''' 1 [[PHOSPHORYL-ETHANOLAMINE]][c]
+
* 1 [[GLY]][c] '''+''' 3 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 3 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[BETAINE]][c] '''+''' 3 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[E_subulatus_02588]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_02593]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_13281]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_13280]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_02592]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_02591]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_02590]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_13282]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_02589]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7119]], ceramide and sphingolipid recycling and degradation (yeast):
 
** '''2''' reactions found over '''16''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_gp_form]]; tool: [[curation]]; comment: gap-filling
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR103262
+
* METANETX-RXN : MNXR113445
{{#set: common-name=phytosphingosine 1-phosphate aldolase}}
+
* LIGAND-RXN:
{{#set: ec-number=ec-4.1.2.27}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R10062 R10062]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32478 32478]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=9}}
+
{{#set: ec_number=ec-2.1.1.162}}
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction comment=gap-filling}}
 +
{{#set: reconstruction source=esub_adding_gp_form}}

Latest revision as of 19:39, 17 March 2021

Reaction RXN-13406

  • direction:
    • left-to-right
  • ec_number:
    • ec-2.1.1.162

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR113445
  • LIGAND-RXN:
  • RHEA: