Difference between revisions of "RXN-9015"

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(Created page with "Category:reaction == Reaction RXN-602 == * ec-number: ** [http://enzyme.expasy.org/EC/1.14.20.4 ec-1.14.20.4] * direction: ** left-to-right * synonymous: ** leucoanthocyan...")
(Created page with "Category:reaction == Reaction RXN-9015 == * common-name: ** n1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) ** spermine oxidase * ec-number: ** [ht...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-602 ==
+
== Reaction RXN-9015 ==
 +
* common-name:
 +
** n1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)
 +
** spermine oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.20.4 ec-1.14.20.4]
+
** [http://enzyme.expasy.org/EC/1.5.3.17 ec-1.5.3.17]
 +
** [http://enzyme.expasy.org/EC/1.5.3.16 ec-1.5.3.16]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
 
−
** leucoanthocyanidin dioxygenase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-590]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-19726]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[SPERMINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-6082]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[SPERMIDINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_20753]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[orthology]]
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* Gene: [[E_subulatus_03592]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_05915]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_20664]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_18411]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_18405]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_17392]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_18629]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_17393]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_12936]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6117]], spermine and spermidine degradation I:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6441]], spermine and spermidine degradation III:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5760]], &beta;-alanine biosynthesis IV:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR140784
+
* METANETX-RXN : MNXR103059
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25805 25805]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05036 R05036]
+
** [http://www.genome.jp/dbget-bin/www_bget?R09076 R09076]
−
{{#set: ec-number=ec-1.14.20.4}}
+
{{#set: common-name=spermine oxidase|n1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)}}
 +
{{#set: ec-number=ec-1.5.3.17|ec-1.5.3.16}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=leucoanthocyanidin dioxygenase}}
+
{{#set: nb gene associated=9}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:39, 17 March 2021

Reaction RXN-9015

  • common-name:
    • n1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)
    • spermine oxidase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6117, spermine and spermidine degradation I:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6441, spermine and spermidine degradation III:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5760, β-alanine biosynthesis IV:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR103059
  • RHEA:
  • LIGAND-RXN:





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