Difference between revisions of "RXN-8767"

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(Created page with "Category:reaction == Reaction VALINE--TRNA-LIGASE-RXN == * common-name: ** valine-trna ligase ** valine—trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.1....")
 
(Created page with "Category:reaction == Reaction RXN-8767 == * common-name: ** cobalt-precorrin-7 c15-methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.289 ec-2.1.1.289] *...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction VALINE--TRNA-LIGASE-RXN ==
+
== Reaction RXN-8767 ==
 
* common-name:
 
* common-name:
−
** valine-trna ligase
+
** cobalt-precorrin-7 c15-methyltransferase
−
** valine—trna ligase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.1.1.9 ec-6.1.1.9]
+
** [http://enzyme.expasy.org/EC/2.1.1.289 ec-2.1.1.289]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[VAL]][c] '''+''' 1 [[VAL-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-VAL-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CPD-9048]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9045]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_03929]]
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* Gene: [[E_subulatus_16722]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16720]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16724]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_16721]]
+
* Gene: [[E_subulatus_03930]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16723]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_22977]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_22978]]
+
* Gene: [[E_subulatus_03931]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16725]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_10900]]
+
* Gene: [[E_subulatus_03932]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_22979]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''6''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
* METANETX-RXN : MNXR111360
−
* ID : O51680
+
* RHEA:
−
{{#set: common-name=valine&mdash;trna ligase|valine-trna ligase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34592 34592]
−
{{#set: ec-number=ec-6.1.1.9}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07775 R07775]
 +
{{#set: common-name=cobalt-precorrin-7 c15-methyltransferase}}
 +
{{#set: ec-number=ec-2.1.1.289}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=10}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Latest revision as of 19:39, 17 March 2021

Reaction RXN-8767

  • common-name:
    • cobalt-precorrin-7 c15-methyltransferase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
    • 6 reactions found over 15 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR111360
  • RHEA:
  • LIGAND-RXN:





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