Difference between revisions of "CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction VALINE--TRNA-LIGASE-RXN == * common-name: ** valine-trna ligase ** valine—trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.1....")
(Created page with "Category:reaction == Reaction CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.104 ec-2.1.1.104] * direction: ** left-to-right ==...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction VALINE--TRNA-LIGASE-RXN ==
+
== Reaction CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN ==
−
* common-name:
 
−
** valine-trna ligase
 
−
** valine—trna ligase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.1.1.9 ec-6.1.1.9]
+
** [http://enzyme.expasy.org/EC/2.1.1.104 ec-2.1.1.104]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[VAL]][c] '''+''' 1 [[VAL-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-VAL-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[FERULOYL-COA]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_15056]]
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* Gene: [[E_subulatus_16722]]
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** Category: [[orthology]]
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** Category: [[annotation]]
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16720]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16724]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_16721]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16723]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_22977]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_22978]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16725]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_10900]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_22979]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging:
+
* [[PWY-6039]], chlorogenic acid biosynthesis I:
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5710]], capsaicin biosynthesis:
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6792]], scopoletin biosynthesis:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7398]], coumarins biosynthesis (engineered):
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-361]], phenylpropanoid biosynthesis:
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-7498]], phenylpropanoids methylation (ice plant):
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis:
 +
** '''7''' reactions found over '''20''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* METANETX-RXN : MNXR124096
+
* METANETX-RXN : MNXR107243
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10705 10705]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16926 16926]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03665 R03665]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01942 R01942]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P28350 P28350]
+
** [http://www.uniprot.org/uniprot/P28034 P28034]
−
** [http://www.uniprot.org/uniprot/P36420 P36420]
+
** [http://www.uniprot.org/uniprot/O65307 O65307]
−
** [http://www.uniprot.org/uniprot/P56000 P56000]
+
** [http://www.uniprot.org/uniprot/Q42945 Q42945]
−
** [http://www.uniprot.org/uniprot/O51680 O51680]
+
** [http://www.uniprot.org/uniprot/O24144 O24144]
−
** [http://www.uniprot.org/uniprot/O67411 O67411]
+
** [http://www.uniprot.org/uniprot/O24149 O24149]
−
** [http://www.uniprot.org/uniprot/O83998 O83998]
+
** [http://www.uniprot.org/uniprot/O24150 O24150]
−
** [http://www.uniprot.org/uniprot/Q9ZCN6 Q9ZCN6]
+
** [http://www.uniprot.org/uniprot/O24151 O24151]
−
** [http://www.uniprot.org/uniprot/Q9Z987 Q9Z987]
+
** [http://www.uniprot.org/uniprot/O04899 O04899]
−
** [http://www.uniprot.org/uniprot/Q9X2D7 Q9X2D7]
+
** [http://www.uniprot.org/uniprot/O49499 O49499]
−
** [http://www.uniprot.org/uniprot/Q9ZK61 Q9ZK61]
+
** [http://www.uniprot.org/uniprot/Q9SVI7 Q9SVI7]
−
** [http://www.uniprot.org/uniprot/Q9CDP6 Q9CDP6]
+
** [http://www.uniprot.org/uniprot/Q40313 Q40313]
−
** [http://www.uniprot.org/uniprot/Q58413 Q58413]
+
** [http://www.uniprot.org/uniprot/Q43095 Q43095]
−
** [http://www.uniprot.org/uniprot/P43834 P43834]
+
** [http://www.uniprot.org/uniprot/O04854 O04854]
−
** [http://www.uniprot.org/uniprot/Q9PPE4 Q9PPE4]
+
** [http://www.uniprot.org/uniprot/O65162 O65162]
−
** [http://www.uniprot.org/uniprot/O84304 O84304]
+
** [http://www.uniprot.org/uniprot/O65362 O65362]
−
** [http://www.uniprot.org/uniprot/P47576 P47576]
 
−
** [http://www.uniprot.org/uniprot/Q94678 Q94678]
 
−
** [http://www.uniprot.org/uniprot/Q04462 Q04462]
 
−
** [http://www.uniprot.org/uniprot/P26640 P26640]
 
−
** [http://www.uniprot.org/uniprot/Q05873 Q05873]
 
−
** [http://www.uniprot.org/uniprot/Q26177 Q26177]
 
−
** [http://www.uniprot.org/uniprot/P75304 P75304]
 
−
** [http://www.uniprot.org/uniprot/Q49021 Q49021]
 
−
** [http://www.uniprot.org/uniprot/P11931 P11931]
 
−
** [http://www.uniprot.org/uniprot/P07806 P07806]
 
−
** [http://www.uniprot.org/uniprot/P07118 P07118]
 
−
** [http://www.uniprot.org/uniprot/O77443 O77443]
 
 
</div>
 
</div>
−
{{#set: common-name=valine-trna ligase|valine&mdash;trna ligase}}
+
{{#set: ec-number=ec-2.1.1.104}}
−
{{#set: ec-number=ec-6.1.1.9}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=10}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=7}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:39, 17 March 2021

Reaction CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6039, chlorogenic acid biosynthesis I:
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5710, capsaicin biosynthesis:
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6792, scopoletin biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7398, coumarins biosynthesis (engineered):
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-361, phenylpropanoid biosynthesis:
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-7498, phenylpropanoids methylation (ice plant):
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis:
    • 7 reactions found over 20 reactions in the full pathway

Reconstruction information

External links





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