Difference between revisions of "RXN-12400"

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(Created page with "Category:reaction == Reaction RXN-13451 == * common-name: ** very-long-chain acyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.8.9 ec-1.3.8.9] * dire...")
(Created page with "Category:reaction == Reaction RXN-12400 == * common-name: ** xyloglucan xllg oligosaccharide β-galactosidase ** beta-galactosidase ** xllg xyloglucan oligosaccharide...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13451 ==
+
== Reaction RXN-12400 ==
 
* common-name:
 
* common-name:
−
** very-long-chain acyl-coa dehydrogenase
+
** xyloglucan xllg oligosaccharide β-galactosidase
 +
** beta-galactosidase
 +
** xllg xyloglucan oligosaccharide β-galactosidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.8.9 ec-1.3.8.9]
+
** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Very-long-Chain-234-Saturated-acyl-CoAs]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[Very-Long-Chain-Trans-23-Dehydroacyl-CoA]][c]
+
* 1 [[CPD-13378]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 2 [[D-galactopyranose]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_23466]]
+
* Gene: [[E_subulatus_00876]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_25108]]
+
* Gene: [[E_subulatus_14853]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_17420]]
+
* Gene: [[E_subulatus_07881]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_25110]]
+
* Gene: [[E_subulatus_00877]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21544]]
+
* Gene: [[E_subulatus_18607]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_25109]]
+
* Gene: [[E_subulatus_14852]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6807]], xyloglucan degradation II (exoglucanase):
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR118091
+
* METANETX-RXN : MNXR117528
−
* RHEA:
+
{{#set: common-name=xyloglucan xllg oligosaccharide β-galactosidase|beta-galactosidase|xllg xyloglucan oligosaccharide β-galactosidase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19182 19182]
+
{{#set: ec-number=ec-3.2.1.23}}
−
{{#set: common-name=very-long-chain acyl-coa dehydrogenase}}
 
−
{{#set: ec-number=ec-1.3.8.9}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=6}}
 
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:39, 17 March 2021

Reaction RXN-12400

  • common-name:
    • xyloglucan xllg oligosaccharide β-galactosidase
    • beta-galactosidase
    • xllg xyloglucan oligosaccharide β-galactosidase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6807, xyloglucan degradation II (exoglucanase):
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117528





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