Difference between revisions of "RXN3O-5293"

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(Created page with "Category:reaction == Reaction DNA-LIGASE-ATP-RXN == * common-name: ** dna ligase (atp) * ec-number: ** [http://enzyme.expasy.org/EC/6.5.1.7 ec-6.5.1.7] ** [http://enzyme.e...")
(Created page with "Category:reaction == Reaction RXN3O-5293 == * direction: ** left-to-right * ec_number: ** ec-2.3.1.86 ** ec-1.3.1.10 == Reaction formula == * 1 NADPH[c] '''+''' 1 Oc...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DNA-LIGASE-ATP-RXN ==
+
== Reaction RXN3O-5293 ==
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* common-name:
 
−
** dna ligase (atp)
 
−
* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.5.1.7 ec-6.5.1.7]
 
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** [http://enzyme.expasy.org/EC/6.5.1.1 ec-6.5.1.1]
 
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** [http://enzyme.expasy.org/EC/6.5.1.6 ec-6.5.1.6]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* ec_number:
 +
** ec-2.3.1.86
 +
** ec-1.3.1.10
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-Hydroxy-Terminated-DNAs]][c] '''+''' 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DNA-N]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[NADPH]][c] '''+''' 1 [[Octadec-2-enoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Stearoyl-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_16239]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_16238]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_02446]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_18782]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY3O-355]], stearate biosynthesis III (fungi):
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR123641
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* METANETX-RXN : MNXR115853
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00381 R00381]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P12000 P12000]
 
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** [http://www.uniprot.org/uniprot/P18858 P18858]
 
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** [http://www.uniprot.org/uniprot/P35970 P35970]
 
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** [http://www.uniprot.org/uniprot/Q9QNG8 Q9QNG8]
 
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** [http://www.uniprot.org/uniprot/Q9PM08 Q9PM08]
 
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** [http://www.uniprot.org/uniprot/Q57635 Q57635]
 
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** [http://www.uniprot.org/uniprot/P49917 P49917]
 
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** [http://www.uniprot.org/uniprot/P49916 P49916]
 
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** [http://www.uniprot.org/uniprot/P37913 P37913]
 
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** [http://www.uniprot.org/uniprot/P51892 P51892]
 
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** [http://www.uniprot.org/uniprot/P16272 P16272]
 
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** [http://www.uniprot.org/uniprot/P33798 P33798]
 
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** [http://www.uniprot.org/uniprot/P00970 P00970]
 
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** [http://www.uniprot.org/uniprot/P00969 P00969]
 
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** [http://www.uniprot.org/uniprot/P04819 P04819]
 
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** [http://www.uniprot.org/uniprot/P19088 P19088]
 
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** [http://www.uniprot.org/uniprot/P07717 P07717]
 
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** [http://www.uniprot.org/uniprot/P26813 P26813]
 
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** [http://www.uniprot.org/uniprot/Q02093 Q02093]
 
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** [http://www.uniprot.org/uniprot/Q23694 Q23694]
 
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** [http://www.uniprot.org/uniprot/Q67480 Q67480]
 
−
** [http://www.uniprot.org/uniprot/Q42572 Q42572]
 
−
** [http://www.uniprot.org/uniprot/P20492 P20492]
 
−
</div>
 
−
{{#set: common-name=dna ligase (atp)}}
 
−
{{#set: ec-number=ec-6.5.1.1|ec-6.5.1.7|ec-6.5.1.6}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=4}}
+
{{#set: ec_number=ec-1.3.1.10|ec-2.3.1.86}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction category=manual}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction comment=annotation}}
 +
{{#set: reconstruction source=esub_adding_annot_form}}

Latest revision as of 19:40, 17 March 2021

Reaction RXN3O-5293

  • direction:
    • left-to-right
  • ec_number:
    • ec-2.3.1.86
    • ec-1.3.1.10

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY3O-355, stearate biosynthesis III (fungi):
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123641





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