Difference between revisions of "RXN-8036"

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(Created page with "Category:reaction == Reaction RXN-8991 == * common-name: ** 3-isopropylmalate dehydratase ** (2r,3s)-3-isopropylmalate hydro-lyase (2-isopropylmaleate-forming) * direction...")
(Created page with "Category:reaction == Reaction RXN-8036 == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.21 ec-3.2.1.21] * direction: ** left-to-right == Reaction formula == * 1 CPD...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-8991 ==
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== Reaction RXN-8036 ==
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* common-name:
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* ec-number:
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** 3-isopropylmalate dehydratase
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** [http://enzyme.expasy.org/EC/3.2.1.21 ec-3.2.1.21]
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** (2r,3s)-3-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)
 
 
* direction:
 
* direction:
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** reversible
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** left-to-right
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* synonymous:
 
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** α-isopropylmalate isomerase
 
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** (2r,3s)-3-isopropylmalate hydro-lyase
 
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** β-isopropylmalate dehydratase
 
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** 3-isopropylmalate hydro-lyase
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''<=>''' 1 [[CPD-9451]][c] '''+''' 1 [[WATER]][c]
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* 1 [[CPD-7417]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-7418]][c] '''+''' 1 [[Glucopyranose]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[E_subulatus_14035]]
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* Gene: [[E_subulatus_16031]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[E_subulatus_00876]]
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* Gene: [[E_subulatus_16033]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_03963]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[E_subulatus_21072]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_16032]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_21073]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_16030]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[LEUSYN-PWY]], L-leucine biosynthesis:
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* [[PWY-5176]], coumarin biosynthesis (via 2-coumarate):
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** '''6''' reactions found over '''6''' reactions in the full pathway
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered):
 
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** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* METANETX-RXN : MNXR100827
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* METANETX-RXN : MNXR96231
 
* RHEA:
 
* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10676 10676]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31224 31224]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04001 R04001]
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** [http://www.genome.jp/dbget-bin/www_bget?R04998 R04998]
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{{#set: common-name=3-isopropylmalate dehydratase|(2r,3s)-3-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)}}
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{{#set: ec-number=ec-3.2.1.21}}
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{{#set: direction=reversible}}
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{{#set: direction=left-to-right}}
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{{#set: synonymous=&alpha;-isopropylmalate isomerase|(2r,3s)-3-isopropylmalate hydro-lyase|&beta;-isopropylmalate dehydratase|3-isopropylmalate hydro-lyase}}
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{{#set: nb gene associated=2}}
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{{#set: nb gene associated=7}}
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{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
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{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:40, 17 March 2021

Reaction RXN-8036

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5176, coumarin biosynthesis (via 2-coumarate):
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR96231
  • RHEA:
  • LIGAND-RXN:





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