Difference between revisions of "RXN-7677"

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(Created page with "Category:reaction == Reaction 1.1.1.39-RXN == * common-name: ** malate dehydrogenase, nad-requiring * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.38 ec-1.1.1.38] * di...")
(Created page with "Category:reaction == Reaction RXN-7677 == * common-name: ** 71-hydroxychlorophyllide a monooxygenase ** chlorophyllide a oxygenase [overall] * direction: ** left-to-right...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.1.1.39-RXN ==
+
== Reaction RXN-7677 ==
 
* common-name:
 
* common-name:
−
** malate dehydrogenase, nad-requiring
+
** 71-hydroxychlorophyllide a monooxygenase
−
* ec-number:
+
** chlorophyllide a oxygenase [overall]
−
** [http://enzyme.expasy.org/EC/1.1.1.38 ec-1.1.1.38]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* synonymous:
 +
** cao
 +
** chlorophyllide a oxygenase
 +
** chlorophyll-b synthase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MAL]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[CPD-7015]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-19759]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_23246]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_07455]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_23247]]
+
* Gene: [[E_subulatus_12890]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_23250]]
+
* Gene: [[E_subulatus_20083]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_23248]]
+
* Gene: [[E_subulatus_06698]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_23249]]
+
* Gene: [[E_subulatus_07456]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_15638]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_14078]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_03342]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_15639]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_16061]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_12888]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_14079]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_16615]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_16614]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_03343]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_12889]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-5068]], chlorophyll cycle:
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
** '''8''' reactions found over '''10''' reactions in the full pathway
 
−
** '''8''' reactions found over '''10''' reactions in the full pathway
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
** '''13''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
* METANETX-RXN : MNXR111774
−
* ID : Q48662
+
* RHEA:
−
{{#set: common-name=malate dehydrogenase, nad-requiring}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22137 22137]
−
{{#set: ec-number=ec-1.1.1.38}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R08204 R08204]
 +
{{#set: common-name=chlorophyllide a oxygenase [overall]|71-hydroxychlorophyllide a monooxygenase}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=5}}
+
{{#set: synonymous=cao|chlorophyllide a oxygenase|chlorophyll-b synthase}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb gene associated=16}}
 +
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction RXN-7677

  • common-name:
    • 71-hydroxychlorophyllide a monooxygenase
    • chlorophyllide a oxygenase [overall]
  • direction:
    • left-to-right
  • synonymous:
    • cao
    • chlorophyllide a oxygenase
    • chlorophyll-b synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5068, chlorophyll cycle:
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR111774
  • RHEA:
  • LIGAND-RXN:

Property "Common-name" (as page type) with input value "chlorophyllide a oxygenase [overall" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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