Difference between revisions of "2.7.1.140-RXN"

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(Created page with "Category:reaction == Reaction CITSYN-RXN == * common-name: ** citrate synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.3.16 ec-2.3.3.16] ** [http://enzyme.expasy....")
 
(Created page with "Category:reaction == Reaction 2.7.1.140-RXN == * direction: ** left-to-right * ec_number: ** ec-2.7.1.140 == Reaction formula == * 1 ATP[c] '''+''' 1 CPD-505[c] ''...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction CITSYN-RXN ==
+
== Reaction 2.7.1.140-RXN ==
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* common-name:
 
−
** citrate synthase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.3.3.16 ec-2.3.3.16]
 
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** [http://enzyme.expasy.org/EC/2.3.3.1 ec-2.3.3.1]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
+
* ec_number:
−
** citrate synthesis
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** ec-2.7.1.140
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** condensing enzyme
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ACETYL-COA]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CIT]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD-505]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-1107]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_08411]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-6365]], D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis:
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6372]], 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium):
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** '''5''' reactions found over '''9''' reactions in the full pathway
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** '''3''' reactions found over '''7''' reactions in the full pathway
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** '''10''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-6362]], 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian):
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** '''10''' reactions found over '''12''' reactions in the full pathway
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** '''10''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-6554]], 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3):
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** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
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** '''8''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY-6366]], D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis:
−
** '''8''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
** '''10''' reactions found over '''16''' reactions in the full pathway
 
−
** '''10''' reactions found over '''16''' reactions in the full pathway
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
** '''12''' reactions found over '''18''' reactions in the full pathway
 
−
** '''12''' reactions found over '''18''' reactions in the full pathway
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
−
* DB : PIR
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* METANETX-RXN : MNXR108200
−
* ID : YKEC
+
* RHEA:
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{{#set: common-name=citrate synthase}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12718 12718]
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{{#set: ec-number=ec-2.3.3.1|ec-2.3.3.16}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03478 R03478]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=condensing enzyme|citrate synthesis}}
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{{#set: ec_number=ec-2.7.1.140}}
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{{#set: nb gene associated=1}}
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{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=13}}
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{{#set: nb pathway associated=5}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=annotation}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=esub_adding_annot_form}}

Latest revision as of 19:40, 17 March 2021

Reaction 2.7.1.140-RXN

  • direction:
    • left-to-right
  • ec_number:
    • ec-2.7.1.140

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6365, D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6372, 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6362, 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6554, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6366, D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR108200
  • RHEA:
  • LIGAND-RXN:





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