Difference between revisions of "RXN1F-93"
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(Created page with "Category:reaction == Reaction RXN-9520 == * common-name: ** (3r)-3-hydroxyhexanoyl-[acyl-carrier protein] dehydratase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86...") |
(Created page with "Category:reaction == Reaction RXN1F-93 == * common-name: ** dihydrokaempferol synthase * ec-number: ** [http://enzyme.expasy.org/EC/1.14.20.6 ec-1.14.20.6] * direction: **...") |
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| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN1F-93 == |
* common-name: | * common-name: | ||
| − | ** | + | ** dihydrokaempferol synthase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.14.20.6 ec-1.14.20.6] |
| − | |||
| − | |||
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[DIHYDROKAEMPFEROL-CMPD]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD1F-90]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[WATER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[E_subulatus_15024]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[E_subulatus_20753]] |
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[E_subulatus_19163]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[E_subulatus_15023]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-6787]], flavonoid biosynthesis (in equisetum): |
| − | ** ''' | + | ** '''6''' reactions found over '''10''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-3101]], flavonol biosynthesis: |
| − | ** ''' | + | ** '''3''' reactions found over '''7''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| − | * METANETX-RXN : | + | * METANETX-RXN : MNXR107965 |
| − | {{#set: common-name= | + | * LIGAND-RXN: |
| − | {{#set: ec-number=ec- | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03126 R03126] |
| + | {{#set: common-name=dihydrokaempferol synthase}} | ||
| + | {{#set: ec-number=ec-1.14.20.6}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=4}} |
{{#set: nb pathway associated=2}} | {{#set: nb pathway associated=2}} | ||
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=ectocarpus_subulatus}} | + | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} |
Latest revision as of 19:40, 17 March 2021
Contents
Reaction RXN1F-93
- common-name:
- dihydrokaempferol synthase
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 DIHYDROKAEMPFEROL-CMPD[c] + 1 OXYGEN-MOLECULE[c] => 1 CARBON-DIOXIDE[c] + 1 CPD1F-90[c] + 1 PROTON[c] + 1 SUC[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_15024
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_20753
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: E_subulatus_19163
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_15023
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6787, flavonoid biosynthesis (in equisetum):
- 6 reactions found over 10 reactions in the full pathway
- PWY-3101, flavonol biosynthesis:
- 3 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR107965
- LIGAND-RXN:
