Difference between revisions of "RXN-4821"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-14025 == * common-name: ** 5'-nucleotidase ** ump phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5] * directio...")
 
(Created page with "Category:reaction == Reaction RXN-4821 == * direction: ** reversible * ec_number: ** ec-3.5.99 == Reaction formula == * 1 DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE[c] '''+'...")
 
(3 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-14025 ==
+
== Reaction RXN-4821 ==
* common-name:
 
** 5'-nucleotidase
 
** ump phosphatase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
 
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 +
* ec_number:
 +
** ec-3.5.99
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[UMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[URIDINE]][c]
+
* 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[L-ALPHA-AMINO-EPSILON-KETO-PIMELATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[E_subulatus_17314]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[E_subulatus_02465]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_17477]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[E_subulatus_10902]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[E_subulatus_17313]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[E_subulatus_13217]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[E_subulatus_02464]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_02463]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_10901]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* [[PWY-2942]], L-lysine biosynthesis III:
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
* [[PWY-7821]]:
 
** '''2''' reactions found over '''n.a''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
* DB : RHEA
+
* METANETX-RXN : MNXR108820
* ID : 29360
+
* RHEA:
{{#set: common-name=5'-nucleotidase|ump phosphatase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24797 24797]
{{#set: ec-number=ec-3.1.3.5}}
+
* LIGAND-RXN:
{{#set: direction=left-to-right}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04336 R04336]
{{#set: nb gene associated=9}}
+
{{#set: direction=reversible}}
{{#set: nb pathway associated=2}}
+
{{#set: ec_number=ec-3.5.99}}
{{#set: reconstruction category=annotation}}
+
{{#set: nb gene associated=0}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: nb pathway associated=1}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction tool=curation}}
 +
{{#set: reconstruction comment=annotation}}
 +
{{#set: reconstruction source=esub_adding_annot_form}}

Latest revision as of 19:40, 17 March 2021

Reaction RXN-4821

  • direction:
    • reversible
  • ec_number:
    • ec-3.5.99

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2942, L-lysine biosynthesis III:
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR108820
  • RHEA:
  • LIGAND-RXN: