Difference between revisions of "RXN0-5180"

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(Created page with "Category:reaction == Reaction RXN3O-1983 == * direction: ** left-to-right == Reaction formula == * 1 HOMO-CIT[c] '''=>''' 1 HOMO-CIS-ACONITATE[c] '''+''' 1 WATER...")
(Created page with "Category:reaction == Reaction RXN0-5180 == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1] * direction: ** left-to-right == Reaction formula == * 1 DELTA3-I...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN3O-1983 ==
+
== Reaction RXN0-5180 ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HOMO-CIT]][c] '''=>''' 1 [[HOMO-CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 1 [[CPD0-1028]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_17550]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_24160]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_01543]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_05634]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_00738]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_00014]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3081]], L-lysine biosynthesis V:
+
* [[PWY-5815]], rubber biosynthesis:
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV:
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[P241-PWY]], coenzyme B biosynthesis:
 
−
** '''2''' reactions found over '''16''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR141287
+
* METANETX-RXN : MNXR109677
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26102 26102]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31282 31282]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03444 R03444]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05555 R05555]
 +
{{#set: ec-number=ec-2.5.1}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction comment=annotation}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:40, 17 March 2021

Reaction RXN0-5180

  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5815, rubber biosynthesis:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR109677
  • RHEA:
  • LIGAND-RXN:





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