Difference between revisions of "POLYNUCLEOTIDE-5-PHOSPHATASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-8228 == * common-name: ** delphinidin 3-o-glucoside 5-o-glucosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.298 ec-2.4...")
 
(Created page with "Category:reaction == Reaction POLYNUCLEOTIDE-5-PHOSPHATASE-RXN == * common-name: ** polynucleotide 5'-phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.33 ec-...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8228 ==
+
== Reaction POLYNUCLEOTIDE-5-PHOSPHATASE-RXN ==
 
* common-name:
 
* common-name:
−
** delphinidin 3-o-glucoside 5-o-glucosyltransferase
+
** polynucleotide 5'-phosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.298 ec-2.4.1.298]
+
** [http://enzyme.expasy.org/EC/3.1.3.33 ec-3.1.3.33]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-12575]][c] '''+''' 1 [[CPD-7117]][c] '''=>''' 1 [[CPD-7139]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[5-ppp-Pur-mRNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-8630]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_03526]]
+
* Gene: [[E_subulatus_18352]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_03377]]
+
* Gene: [[E_subulatus_18354]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_18351]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_18353]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[PWY-7375]], mRNA capping I:
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: common-name=delphinidin 3-o-glucoside 5-o-glucosyltransferase}}
+
* METANETX-RXN : MNXR116142
−
{{#set: ec-number=ec-2.4.1.298}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02249 R02249]
 +
{{#set: common-name=polynucleotide 5'-phosphatase}}
 +
{{#set: ec-number=ec-3.1.3.33}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction POLYNUCLEOTIDE-5-PHOSPHATASE-RXN

  • common-name:
    • polynucleotide 5'-phosphatase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7375, mRNA capping I:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR116142
  • LIGAND-RXN:





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