Difference between revisions of "RXN-4021"

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(Created page with "Category:reaction == Reaction 2.8.1.6-RXN == * common-name: ** biotin synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.8.1.6 ec-2.8.1.6] * direction: ** left-to-rig...")
(Created page with "Category:reaction == Reaction RXN-4021 == * common-name: ** sterol methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.41 ec-2.1.1.41] * direction: ** lef...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.8.1.6-RXN ==
+
== Reaction RXN-4021 ==
 
* common-name:
 
* common-name:
−
** biotin synthase
+
** sterol methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.8.1.6 ec-2.8.1.6]
+
** [http://enzyme.expasy.org/EC/2.1.1.41 ec-2.1.1.41]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DETHIOBIOTIN]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''=>''' 1 [[BIOTIN]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c]
+
* 1 [[CYCLOARTENOL]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-696]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_02357]]
+
* Gene: [[E_subulatus_18116]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_18134]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II:
+
* [[PWY-7155]], 7-dehydroporiferasterol biosynthesis:
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I:
+
* [[PWY-2541]], phytosterol biosynthesis (plants):
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''7''' reactions found over '''35''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR96958
−
* METANETX-RXN : MNXR115224
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22061 22061]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01078 R01078]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07481 R07481]
−
* UNIPROT:
+
{{#set: common-name=sterol methyltransferase}}
−
** [http://www.uniprot.org/uniprot/Q9JRW7 Q9JRW7]
+
{{#set: ec-number=ec-2.1.1.41}}
−
** [http://www.uniprot.org/uniprot/Q9PLZ3 Q9PLZ3]
 
−
** [http://www.uniprot.org/uniprot/P53557 P53557]
 
−
** [http://www.uniprot.org/uniprot/O67104 O67104]
 
−
** [http://www.uniprot.org/uniprot/P44987 P44987]
 
−
** [http://www.uniprot.org/uniprot/Q58692 Q58692]
 
−
** [http://www.uniprot.org/uniprot/P0A506 P0A506]
 
−
** [http://www.uniprot.org/uniprot/Q9Z6L5 Q9Z6L5]
 
−
** [http://www.uniprot.org/uniprot/Q9JUE3 Q9JUE3]
 
−
** [http://www.uniprot.org/uniprot/P46396 P46396]
 
−
** [http://www.uniprot.org/uniprot/Q47862 Q47862]
 
−
** [http://www.uniprot.org/uniprot/P19206 P19206]
 
−
** [http://www.uniprot.org/uniprot/P32451 P32451]
 
−
** [http://www.uniprot.org/uniprot/P54967 P54967]
 
−
** [http://www.uniprot.org/uniprot/P46715 P46715]
 
−
** [http://www.uniprot.org/uniprot/P73538 P73538]
 
−
** [http://www.uniprot.org/uniprot/P12996 P12996]
 
−
** [http://www.uniprot.org/uniprot/O59778 O59778]
 
−
</div>
 
−
{{#set: common-name=biotin synthase}}
 
−
{{#set: ec-number=ec-2.8.1.6}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction RXN-4021

  • common-name:
    • sterol methyltransferase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7155, 7-dehydroporiferasterol biosynthesis:
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-2541, phytosterol biosynthesis (plants):
    • 7 reactions found over 35 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR96958
  • LIGAND-RXN:





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