Difference between revisions of "RXN-4305"

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(Created page with "Category:reaction == Reaction GTP-CYCLOHYDRO-II-RXN == * common-name: ** gtp cyclohydrolase ii * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.25 ec-3.5.4.25] * directi...")
 
(Created page with "Category:reaction == Reaction RXN-4305 == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.112 ec-2.5.1.112] * direction: ** left-to-right == Reaction formula == * 1 A...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction GTP-CYCLOHYDRO-II-RXN ==
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== Reaction RXN-4305 ==
* common-name:
 
** gtp cyclohydrolase ii
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.5.4.25 ec-3.5.4.25]
+
** [http://enzyme.expasy.org/EC/2.5.1.112 ec-2.5.1.112]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GTP]][c] '''+''' 3 [[WATER]][c] '''=>''' 1 [[DIAMINO-OH-PHOSPHORIBOSYLAMINO-PYR]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
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* 1 [[ADP]][c] '''+''' 1 [[CPD-4211]][c] '''=>''' 1 [[CPD-4203]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_18127]]
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* Gene: [[E_subulatus_15099]]
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[E_subulatus_04571]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[E_subulatus_04573]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[E_subulatus_04572]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[E_subulatus_18126]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7991]]:
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* [[PWY-2681]], trans-zeatin biosynthesis:
** '''3''' reactions found over '''n.a''' reactions in the full pathway
+
** '''2''' reactions found over '''11''' reactions in the full pathway
** '''3''' reactions found over '''n.a''' reactions in the full pathway
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* DB : LIGAND-RXN
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* METANETX-RXN : MNXR111633
* ID : R00425
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* RHEA:
{{#set: common-name=gtp cyclohydrolase ii}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36328 36328]
{{#set: ec-number=ec-3.5.4.25}}
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* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R08052 R08052]
 +
{{#set: ec-number=ec-2.5.1.112}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=5}}
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{{#set: nb gene associated=1}}
{{#set: nb pathway associated=4}}
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{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:40, 17 March 2021

Reaction RXN-4305

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2681, trans-zeatin biosynthesis:
    • 2 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR111633
  • RHEA:
  • LIGAND-RXN: