Difference between revisions of "5.1.1.18-RXN"

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(Created page with "Category:reaction == Reaction RXN0-1133 == * common-name: ** lipoate acetyltransferase ** dihydrolipoyllysine-residue acetyltransferase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction 5.1.1.18-RXN == * common-name: ** serine racemase * ec-number: ** [http://enzyme.expasy.org/EC/5.1.1.18 ec-5.1.1.18] * direction: ** left-to-...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-1133 ==
+
== Reaction 5.1.1.18-RXN ==
 
* common-name:
 
* common-name:
−
** lipoate acetyltransferase
+
** serine racemase
−
** dihydrolipoyllysine-residue acetyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.12 ec-2.3.1.12]
+
** [http://enzyme.expasy.org/EC/5.1.1.18 ec-5.1.1.18]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Pyruvate-dehydrogenase-dihydrolipoate]][c]
+
* 1 [[SER]][c] '''=>''' 1 [[D-SERINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_19867]]
+
* Gene: [[E_subulatus_08899]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21824]]
+
* Gene: [[E_subulatus_05630]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21823]]
+
* Gene: [[E_subulatus_05629]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_18266]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21822]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA I:
+
* [[PWY-6196]], D-serine degradation:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY-6455]], vancomycin resistance II:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR104348
−
* METANETX-RXN : MNXR123104
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10981 10981]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02569 R02569]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00589 R00589]
−
* UNIPROT:
+
{{#set: common-name=serine racemase}}
−
** [http://www.uniprot.org/uniprot/Q01991 Q01991]
+
{{#set: ec-number=ec-5.1.1.18}}
−
** [http://www.uniprot.org/uniprot/P12695 P12695]
 
−
** [http://www.uniprot.org/uniprot/Q7M2M8 Q7M2M8]
 
−
** [http://www.uniprot.org/uniprot/P10515 P10515]
 
−
** [http://www.uniprot.org/uniprot/Q39082 Q39082]
 
−
** [http://www.uniprot.org/uniprot/Q9TRP7 Q9TRP7]
 
−
** [http://www.uniprot.org/uniprot/Q7M0X6 Q7M0X6]
 
−
** [http://www.uniprot.org/uniprot/Q59098 Q59098]
 
−
** [http://www.uniprot.org/uniprot/Q9PF09 Q9PF09]
 
−
** [http://www.uniprot.org/uniprot/P35489 P35489]
 
−
** [http://www.uniprot.org/uniprot/P21883 P21883]
 
−
** [http://www.uniprot.org/uniprot/Q59658 Q59658]
 
−
** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
 
−
** [http://www.uniprot.org/uniprot/Q59298 Q59298]
 
−
** [http://www.uniprot.org/uniprot/P45118 P45118]
 
−
** [http://www.uniprot.org/uniprot/Q54102 Q54102]
 
−
** [http://www.uniprot.org/uniprot/P11961 P11961]
 
−
** [http://www.uniprot.org/uniprot/Q59821 Q59821]
 
−
** [http://www.uniprot.org/uniprot/P08461 P08461]
 
−
** [http://www.uniprot.org/uniprot/Q16791 Q16791]
 
−
** [http://www.uniprot.org/uniprot/Q41737 Q41737]
 
−
** [http://www.uniprot.org/uniprot/O64968 O64968]
 
−
** [http://www.uniprot.org/uniprot/P10802 P10802]
 
−
** [http://www.uniprot.org/uniprot/P06959 P06959]
 
−
</div>
 
−
{{#set: common-name=lipoate acetyltransferase|dihydrolipoyllysine-residue acetyltransferase}}
 
−
{{#set: ec-number=ec-2.3.1.12}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction 5.1.1.18-RXN

  • common-name:
    • serine racemase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6196, D-serine degradation:
    • 2 reactions found over n.a reactions in the full pathway
  • PWY-6455, vancomycin resistance II:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR104348
  • RHEA:
  • LIGAND-RXN:





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