Difference between revisions of "MANNKIN-RXN"

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(Created page with "Category:reaction == Reaction RIBULP3EPIM-RXN == * common-name: ** ribulose-phosphate 3-epimerase * ec-number: ** [http://enzyme.expasy.org/EC/5.1.3.1 ec-5.1.3.1] * direct...")
(Created page with "Category:reaction == Reaction MANNKIN-RXN == * direction: ** left-to-right * ec_number: ** ec-2.7.1.7 == Reaction formula == * 1 ATP[c] '''+''' 1 D-mannopyranose[c...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RIBULP3EPIM-RXN ==
+
== Reaction MANNKIN-RXN ==
−
* common-name:
 
−
** ribulose-phosphate 3-epimerase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/5.1.3.1 ec-5.1.3.1]
 
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* ec_number:
 +
** ec-2.7.1.7
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[RIBULOSE-5P]][c] '''<=>''' 1 [[XYLULOSE-5-PHOSPHATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[D-mannopyranose]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-15979]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_07361]]
+
* Gene: [[EsuBft1656_9a]]
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** Category: [[annotation]]
+
** Category: [[manual]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[esub_adding_annot_form]], Tool: [[unknown-tool]], Assignment: n.a, Comment: annotation
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_18114]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle):
+
* [[PWY-3861]], mannitol degradation II:
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[P21-PWY]], pentose phosphate pathway (partial):
+
* [[PWY-6140]], CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch) I:
+
* [[PWY-6992]], 1,5-anhydrofructose degradation:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle:
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5723]], Rubisco shunt:
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[P124-PWY]], Bifidobacterium shunt:
 
−
** '''11''' reactions found over '''15''' reactions in the full pathway
 
−
* [[P122-PWY]], heterolactic fermentation:
 
−
** '''14''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR104083
+
* METANETX-RXN : MNXR95795
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13680 13680]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11029 11029]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01529 R01529]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01326 R01326]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P40117 P40117]
+
{{#set: ec_number=ec-2.7.1.7}}
−
** [http://www.uniprot.org/uniprot/Q9CEB9 Q9CEB9]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P0AG07 P0AG07]
+
{{#set: nb pathway associated=3}}
−
** [http://www.uniprot.org/uniprot/Q9PI57 Q9PI57]
+
{{#set: reconstruction category=manual}}
−
** [http://www.uniprot.org/uniprot/Q9JUA9 Q9JUA9]
+
{{#set: reconstruction tool=curation}}
−
** [http://www.uniprot.org/uniprot/P45455 P45455]
+
{{#set: reconstruction comment=annotation}}
−
** [http://www.uniprot.org/uniprot/Q43157 Q43157]
+
{{#set: reconstruction source=esub_adding_annot_form}}
−
** [http://www.uniprot.org/uniprot/Q43843 Q43843]
 
−
** [http://www.uniprot.org/uniprot/P74061 P74061]
 
−
** [http://www.uniprot.org/uniprot/O23782 O23782]
 
−
** [http://www.uniprot.org/uniprot/P51012 P51012]
 
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{{#set: common-name=ribulose-phosphate 3-epimerase}}
 
−
{{#set: ec-number=ec-5.1.3.1}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=8}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
 

Latest revision as of 19:40, 17 March 2021

Reaction MANNKIN-RXN

  • direction:
    • left-to-right
  • ec_number:
    • ec-2.7.1.7

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3861, mannitol degradation II:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6140, CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis:
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6992, 1,5-anhydrofructose degradation:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95795
  • RHEA:
  • LIGAND-RXN:





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