Difference between revisions of "RXN-8988"

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(Created page with "Category:reaction == Reaction ADENOSYLHOMOCYSTEINASE-RXN == * common-name: ** adenosylhomocysteinase * ec-number: ** [http://enzyme.expasy.org/EC/3.3.1.1 ec-3.3.1.1] * dir...")
 
(Created page with "Category:reaction == Reaction RXN-8988 == * common-name: ** itaconyl-coa synthetase * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.4 ec-6.2.1.4] * direction: ** left-t...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ADENOSYLHOMOCYSTEINASE-RXN ==
+
== Reaction RXN-8988 ==
 
* common-name:
 
* common-name:
−
** adenosylhomocysteinase
+
** itaconyl-coa synthetase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.3.1.1 ec-3.3.1.1]
+
** [http://enzyme.expasy.org/EC/6.2.1.4 ec-6.2.1.4]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENOSINE]][c] '''+''' 1 [[HOMO-CYS]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[ITACONATE]][c] '''=>''' 1 [[CPD-1137]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_22943]]
+
* Gene: [[E_subulatus_12371]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_00867]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_02430]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_02431]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[PWY-5749]], itaconate degradation:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : RHEA
+
* METANETX-RXN : MNXR100883
−
* ID : 21708
+
* LIGAND-RXN:
−
{{#set: common-name=adenosylhomocysteinase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02405 R02405]
−
{{#set: ec-number=ec-3.3.1.1}}
+
{{#set: common-name=itaconyl-coa synthetase}}
 +
{{#set: ec-number=ec-6.2.1.4}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction RXN-8988

  • common-name:
    • itaconyl-coa synthetase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5749, itaconate degradation:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR100883
  • LIGAND-RXN:





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