Difference between revisions of "BIOTINLIG-RXN"

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(Created page with "Category:reaction == Reaction 1.5.1.20-RXN == * common-name: ** methylenetetrahydrofolate reductase (nad(p)h) ** 5,10-methylenetetrahydrofolate reductase * ec-number: ** [...")
(Created page with "Category:reaction == Reaction BIOTINLIG-RXN == * common-name: ** biotin-[acetyl-coa-carboxylase] ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.15 ec-6.3.4.15]...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.5.1.20-RXN ==
+
== Reaction BIOTINLIG-RXN ==
 
* common-name:
 
* common-name:
−
** methylenetetrahydrofolate reductase (nad(p)h)
+
** biotin-[acetyl-coa-carboxylase] ligase
−
** 5,10-methylenetetrahydrofolate reductase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.5.1.20 ec-1.5.1.20]
+
** [http://enzyme.expasy.org/EC/6.3.4.15 ec-6.3.4.15]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[BCCP-L-lysine]][c] '''+''' 1 [[BIOTIN]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[BCCP-biotin-L-lysine]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_13632]]
+
* Gene: [[E_subulatus_03807]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_01980]]
+
* Gene: [[E_subulatus_16341]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_03808]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
+
* [[PWY0-1264]], biotin-carboxyl carrier protein assembly:
−
** '''5''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[1CMET2-PWY]], folate transformations III (E. coli):
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2201]], folate transformations I:
 
−
** '''12''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-3841]], folate transformations II (plants):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR114983
+
* METANETX-RXN : MNXR115739
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07168 R07168]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PN93 Q9PN93]
+
** [http://www.uniprot.org/uniprot/P06709 P06709]
−
** [http://www.uniprot.org/uniprot/Q9JUT7 Q9JUT7]
+
** [http://www.uniprot.org/uniprot/Q9PJ27 Q9PJ27]
−
** [http://www.uniprot.org/uniprot/P45208 P45208]
+
** [http://www.uniprot.org/uniprot/Q9CEQ6 Q9CEQ6]
−
** [http://www.uniprot.org/uniprot/P0AEZ1 P0AEZ1]
+
** [http://www.uniprot.org/uniprot/Q9CED9 Q9CED9]
−
** [http://www.uniprot.org/uniprot/P11003 P11003]
+
** [http://www.uniprot.org/uniprot/Q9JWI7 Q9JWI7]
−
** [http://www.uniprot.org/uniprot/P46151 P46151]
+
** [http://www.uniprot.org/uniprot/P48445 P48445]
−
** [http://www.uniprot.org/uniprot/P53128 P53128]
+
** [http://www.uniprot.org/uniprot/P72816 P72816]
−
{{#set: common-name=5,10-methylenetetrahydrofolate reductase|methylenetetrahydrofolate reductase (nad(p)h)}}
+
{{#set: common-name=biotin-[acetyl-coa-carboxylase] ligase}}
−
{{#set: ec-number=ec-1.5.1.20}}
+
{{#set: ec-number=ec-6.3.4.15}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction BIOTINLIG-RXN

  • common-name:
    • biotin-[acetyl-coa-carboxylase] ligase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1264, biotin-carboxyl carrier protein assembly:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "biotin-[acetyl-coa-carboxylase] ligase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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