Difference between revisions of "RXN0-302"

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(Created page with "Category:reaction == Reaction 13-BETA-GLUCAN-SYNTHASE-RXN == * common-name: ** callose synthase ** 1,3-beta-d-glucan synthase * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction RXN0-302 == * common-name: ** 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.6.1.12 ec-...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 13-BETA-GLUCAN-SYNTHASE-RXN ==
+
== Reaction RXN0-302 ==
 
* common-name:
 
* common-name:
−
** callose synthase
+
** 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase
−
** 1,3-beta-d-glucan synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.34 ec-2.4.1.34]
+
** [http://enzyme.expasy.org/EC/4.6.1.12 ec-4.6.1.12]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[1-3-beta-D-Glucans]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[1-3-beta-D-Glucans]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET]][c] '''=>''' 1 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][c] '''+''' 1 [[CMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_04681]]
−
* Gene: [[E_subulatus_02079]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_20468]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_20469]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_17774]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_17399]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_24678]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_24677]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_20467]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_17398]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_19679]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6773]], 1,3-&beta;-D-glucan biosynthesis:
+
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7560]], methylerythritol phosphate pathway II:
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR143736
+
* METANETX-RXN : MNXR101424
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23865 23865]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03118 R03118]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05637 R05637]
−
* UNIPROT:
+
{{#set: common-name=2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase}}
−
** [http://www.uniprot.org/uniprot/P38631 P38631]
+
{{#set: ec-number=ec-4.6.1.12}}
−
** [http://www.uniprot.org/uniprot/P40989 P40989]
 
−
** [http://www.uniprot.org/uniprot/Q10287 Q10287]
 
−
** [http://www.uniprot.org/uniprot/P38678 P38678]
 
−
{{#set: common-name=1,3-beta-d-glucan synthase|callose synthase}}
 
−
{{#set: ec-number=ec-2.4.1.34}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=10}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction RXN0-302

  • common-name:
    • 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • NONMEVIPP-PWY, methylerythritol phosphate pathway I:
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7560, methylerythritol phosphate pathway II:
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR101424
  • RHEA:
  • LIGAND-RXN:





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