Difference between revisions of "DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN"

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(Created page with "Category:reaction == Reaction 3.1.3.67-RXN == * common-name: ** phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.6...")
(Created page with "Category:reaction == Reaction DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN == * common-name: ** diphosphomevalonate decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4.1....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.1.3.67-RXN ==
+
== Reaction DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN ==
 
* common-name:
 
* common-name:
−
** phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase
+
** diphosphomevalonate decarboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.67 ec-3.1.3.67]
+
** [http://enzyme.expasy.org/EC/4.1.1.33 ec-4.1.1.33]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PHOSPHATIDYLINOSITOL-345-TRIPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD-641]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_15367]]
+
* Gene: [[E_subulatus_21847]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_21846]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_21845]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[E_subulatus_15371]]
+
* Gene: [[E_subulatus_21848]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6368]], 3-phosphoinositide degradation:
+
* [[PWY-7391]], isoprene biosynthesis II (engineered):
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-922]], mevalonate pathway I (eukaryotes and bacteria):
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR102677
+
* METANETX-RXN : MNXR97776
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25018 25018]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23733 23733]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04513 R04513]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01121 R01121]
−
{{#set: common-name=phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase}}
+
* UNIPROT:
−
{{#set: ec-number=ec-3.1.3.67}}
+
** [http://www.uniprot.org/uniprot/P32377 P32377]
 +
** [http://www.uniprot.org/uniprot/Q9U2A1 Q9U2A1]
 +
** [http://www.uniprot.org/uniprot/Q9U294 Q9U294]
 +
** [http://www.uniprot.org/uniprot/O13963 O13963]
 +
** [http://www.uniprot.org/uniprot/Q9M381 Q9M381]
 +
** [http://www.uniprot.org/uniprot/O23722 O23722]
 +
{{#set: common-name=diphosphomevalonate decarboxylase}}
 +
{{#set: ec-number=ec-4.1.1.33}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
 
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN

  • common-name:
    • diphosphomevalonate decarboxylase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7391, isoprene biosynthesis II (engineered):
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-922, mevalonate pathway I (eukaryotes and bacteria):
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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