Difference between revisions of "RXN-7607"

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(Created page with "Category:reaction == Reaction 3.1.26.3-RXN == * common-name: ** ribonuclease iii ** endoribonuclease * ec-number: ** [http://enzyme.expasy.org/EC/3.1.26.3 ec-3.1.26.3] * d...")
(Created page with "Category:reaction == Reaction RXN-7607 == * common-name: ** 5'-nucleotidase ** inosine-5'-phosphate phosphohydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.99...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.1.26.3-RXN ==
+
== Reaction RXN-7607 ==
 
* common-name:
 
* common-name:
−
** ribonuclease iii
+
** 5'-nucleotidase
−
** endoribonuclease
+
** inosine-5'-phosphate phosphohydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.26.3 ec-3.1.26.3]
+
** [http://enzyme.expasy.org/EC/3.1.3.99 ec-3.1.3.99]
 +
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[RNASE-III-MRNA-PROCESSING-SUBSTRATE]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[RNASE-III-PROCESSING-PRODUCT-MRNA]][c] '''+''' 2 [[mRNA-Fragments]][c]
+
* 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSINE]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[E_subulatus_13772]]
+
* Gene: [[E_subulatus_17314]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21769]]
+
* Gene: [[E_subulatus_02465]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_21384]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_21768]]
+
* Gene: [[E_subulatus_10901]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21385]]
+
* Gene: [[E_subulatus_10902]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21387]]
+
* Gene: [[E_subulatus_13217]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_12947]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21767]]
+
* Gene: [[E_subulatus_17477]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21386]]
+
* Gene: [[E_subulatus_02463]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_12946]]
+
* Gene: [[E_subulatus_02464]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_21383]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_12945]]
+
* Gene: [[E_subulatus_17313]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_19687]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_19686]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_19688]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_13771]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6596]], adenosine nucleotides degradation I:
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR115277
+
* METANETX-RXN : MNXR102030
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/Q9PM40 Q9PM40]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27719 27719]
−
** [http://www.uniprot.org/uniprot/P51833 P51833]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/Q9CHD0 Q9CHD0]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01126 R01126]
−
** [http://www.uniprot.org/uniprot/Q9JVD3 Q9JVD3]
+
{{#set: common-name=5'-nucleotidase|inosine-5'-phosphate phosphohydrolase}}
−
** [http://www.uniprot.org/uniprot/P44441 P44441]
+
{{#set: ec-number=ec-3.1.3.5|ec-3.1.3.99}}
−
** [http://www.uniprot.org/uniprot/P0A7Y0 P0A7Y0]
 
−
** [http://www.uniprot.org/uniprot/P09155 P09155]
 
−
** [http://www.uniprot.org/uniprot/Q52698 Q52698]
 
−
** [http://www.uniprot.org/uniprot/Q49034 Q49034]
 
−
** [http://www.uniprot.org/uniprot/O69469 O69469]
 
−
{{#set: common-name=ribonuclease iii|endoribonuclease}}
 
−
{{#set: ec-number=ec-3.1.26.3}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=16}}
+
{{#set: nb gene associated=9}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction RXN-7607

  • common-name:
    • 5'-nucleotidase
    • inosine-5'-phosphate phosphohydrolase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6596, adenosine nucleotides degradation I:
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR102030
  • RHEA:
  • LIGAND-RXN:





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