Difference between revisions of "RXN-13163"

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(Created page with "Category:reaction == Reaction RXN-8101 == * common-name: ** methylamine-specific methylcobalamin:coenzyme m methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction RXN-13163 == * common-name: ** (2s)-2-isopropylmalate hydro-lyase (2-isopropylmaleate-forming) ** 3-isopropylmalate dehydratase * ec-number:...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8101 ==
+
== Reaction RXN-13163 ==
 
* common-name:
 
* common-name:
−
** methylamine-specific methylcobalamin:coenzyme m methyltransferase
+
** (2s)-2-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)
 +
** 3-isopropylmalate dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.247 ec-2.1.1.247]
+
** [http://enzyme.expasy.org/EC/4.2.1.33 ec-4.2.1.33]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CoM]][c] '''+''' 1 [[Methylated-MtbC-Proteins]][c] '''=>''' 1 [[Me-CoM]][c] '''+''' 1 [[MtbC-Proteins]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''<=>''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_03932]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_21072]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_16031]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_21073]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_03963]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_03931]]
+
* Gene: [[E_subulatus_16030]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_03929]]
+
* Gene: [[E_subulatus_16032]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_03930]]
+
* Gene: [[E_subulatus_16033]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5248]], methanogenesis from dimethylamine:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR122142
+
* METANETX-RXN : MNXR113536
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04001 R04001]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=45217 45217]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10679 10679]
−
{{#set: common-name=methylamine-specific methylcobalamin:coenzyme m methyltransferase}}
+
{{#set: common-name=3-isopropylmalate dehydratase|(2s)-2-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)}}
−
{{#set: ec-number=ec-2.1.1.247}}
+
{{#set: ec-number=ec-4.2.1.33}}
−
{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=7}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction RXN-13163

  • common-name:
    • (2s)-2-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)
    • 3-isopropylmalate dehydratase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR113536
  • LIGAND-RXN:
  • RHEA:





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