Difference between revisions of "NAD-SYNTH-GLN-RXN"

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(Created page with "Category:reaction == Reaction RXN0-1134 == * common-name: ** pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase ** pyruvate dehydrogena...")
(Created page with "Category:reaction == Reaction NAD-SYNTH-GLN-RXN == * common-name: ** nad+ synthetase, glutamine dependent * ec-number: ** [http://enzyme.expasy.org/EC/6.3.5.1 ec-6.3.5.1]...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-1134 ==
+
== Reaction NAD-SYNTH-GLN-RXN ==
 
* common-name:
 
* common-name:
−
** pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase
+
** nad+ synthetase, glutamine dependent
−
** pyruvate dehydrogenase (acetyl-transferring)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.4.1 ec-1.2.4.1]
+
** [http://enzyme.expasy.org/EC/6.3.5.1 ec-6.3.5.1]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_02152]]
+
* Gene: [[E_subulatus_02877]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_14278]]
+
* Gene: [[E_subulatus_02875]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_02151]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_02149]]
+
* Gene: [[E_subulatus_02876]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_02150]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_02874]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-7761]], NAD salvage pathway II (PNC IV cycle):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5381]], NAD salvage (plants):
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 +
* [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate):
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I (PNC VI cycle):
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY3O-4107]], NAD salvage pathway V (PNC V cycle):
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
* METANETX-RXN : MNXR97678
−
* ID : P47516
+
* RHEA:
−
{{#set: common-name=pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase|pyruvate dehydrogenase (acetyl-transferring)}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24385 24385]
−
{{#set: ec-number=ec-1.2.4.1}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00257 R00257]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9PPB0 Q9PPB0]
 +
** [http://www.uniprot.org/uniprot/Q9JTY7 Q9JTY7]
 +
** [http://www.uniprot.org/uniprot/Q9CGJ4 Q9CGJ4]
 +
** [http://www.uniprot.org/uniprot/Q9Z4V9 Q9Z4V9]
 +
{{#set: common-name=nad+ synthetase, glutamine dependent}}
 +
{{#set: ec-number=ec-6.3.5.1}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=6}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction NAD-SYNTH-GLN-RXN

  • common-name:
    • nad+ synthetase, glutamine dependent
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7761, NAD salvage pathway II (PNC IV cycle):
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-5381, NAD salvage (plants):
    • 6 reactions found over 11 reactions in the full pathway
  • PYRIDNUCSYN-PWY, NAD de novo biosynthesis I (from aspartate):
    • 6 reactions found over 6 reactions in the full pathway
  • PYRIDNUCSAL-PWY, NAD salvage pathway I (PNC VI cycle):
    • 4 reactions found over 7 reactions in the full pathway
  • PWY3O-4107, NAD salvage pathway V (PNC V cycle):
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-5653, NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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