Difference between revisions of "NAD-SYNTH-GLN-RXN"
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(Created page with "Category:reaction == Reaction RXN66-469 == * common-name: ** 3-methyl-branched fatty acyl-coa ligase ** 3-methyl-branched 2,3,4-saturated fatty acyl-coa ligase * ec-number...") |
(Created page with "Category:reaction == Reaction NAD-SYNTH-GLN-RXN == * common-name: ** nad+ synthetase, glutamine dependent * ec-number: ** [http://enzyme.expasy.org/EC/6.3.5.1 ec-6.3.5.1]...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction NAD-SYNTH-GLN-RXN == |
* common-name: | * common-name: | ||
− | ** | + | ** nad+ synthetase, glutamine dependent |
− | |||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/6. | + | ** [http://enzyme.expasy.org/EC/6.3.5.1 ec-6.3.5.1] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[E_subulatus_02877]] | |
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_02875]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_02876]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[E_subulatus_02874]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
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== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[PWY-7761]], NAD salvage pathway II (PNC IV cycle): |
− | ** '''3''' reactions found over ''' | + | ** '''3''' reactions found over '''5''' reactions in the full pathway |
+ | * [[PWY-5381]], NAD salvage (plants): | ||
+ | ** '''6''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate): | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PYRIDNUCSAL-PWY]], NAD salvage pathway I (PNC VI cycle): | ||
+ | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY3O-4107]], NAD salvage pathway V (PNC V cycle): | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | * METANETX-RXN : | + | * METANETX-RXN : MNXR97678 |
− | {{#set: common-name= | + | * RHEA: |
− | {{#set: ec-number=ec-6. | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24385 24385] |
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00257 R00257] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PPB0 Q9PPB0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JTY7 Q9JTY7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CGJ4 Q9CGJ4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z4V9 Q9Z4V9] | ||
+ | {{#set: common-name=nad+ synthetase, glutamine dependent}} | ||
+ | {{#set: ec-number=ec-6.3.5.1}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=4}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=ectocarpus_subulatus}} | + | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} |
Latest revision as of 19:41, 17 March 2021
Contents
Reaction NAD-SYNTH-GLN-RXN
- common-name:
- nad+ synthetase, glutamine dependent
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 ATP[c] + 1 DEAMIDO-NAD[c] + 1 GLN[c] + 1 WATER[c] => 1 AMP[c] + 1 GLT[c] + 1 NAD[c] + 1 PPI[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_02877
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_02875
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_02876
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: E_subulatus_02874
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7761, NAD salvage pathway II (PNC IV cycle):
- 3 reactions found over 5 reactions in the full pathway
- PWY-5381, NAD salvage (plants):
- 6 reactions found over 11 reactions in the full pathway
- PYRIDNUCSYN-PWY, NAD de novo biosynthesis I (from aspartate):
- 6 reactions found over 6 reactions in the full pathway
- PYRIDNUCSAL-PWY, NAD salvage pathway I (PNC VI cycle):
- 4 reactions found over 7 reactions in the full pathway
- PWY3O-4107, NAD salvage pathway V (PNC V cycle):
- 3 reactions found over 5 reactions in the full pathway
- PWY-5653, NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde:
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links