Difference between revisions of "3.1.26.3-RXN"

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(Created page with "Category:reaction == Reaction 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN == * common-name: ** phosphatidylinositol 3-kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.137...")
(Created page with "Category:reaction == Reaction 3.1.26.3-RXN == * common-name: ** ribonuclease iii ** endoribonuclease * ec-number: ** [http://enzyme.expasy.org/EC/3.1.26.3 ec-3.1.26.3] * d...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN ==
+
== Reaction 3.1.26.3-RXN ==
 
* common-name:
 
* common-name:
−
** phosphatidylinositol 3-kinase
+
** ribonuclease iii
 +
** endoribonuclease
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.137 ec-2.7.1.137]
+
** [http://enzyme.expasy.org/EC/3.1.26.3 ec-3.1.26.3]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-177]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[RNASE-III-MRNA-PROCESSING-SUBSTRATE]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[RNASE-III-PROCESSING-PRODUCT-MRNA]][c] '''+''' 2 [[mRNA-Fragments]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_15525]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_13772]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_21769]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_21384]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_15524]]
+
* Gene: [[E_subulatus_21768]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_21385]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_17191]]
+
* Gene: [[E_subulatus_21387]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_11533]]
+
* Gene: [[E_subulatus_12947]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_21767]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_21386]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_12946]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_21383]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_12945]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_19687]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_19686]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_19688]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_13771]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6352]], 3-phosphoinositide biosynthesis:
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR115277
−
* METANETX-RXN : MNXR114878
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12710 12710]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03362 R03362]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P22543 P22543]
+
** [http://www.uniprot.org/uniprot/Q9PM40 Q9PM40]
−
** [http://www.uniprot.org/uniprot/Q13315 Q13315]
+
** [http://www.uniprot.org/uniprot/P51833 P51833]
−
** [http://www.uniprot.org/uniprot/P32871 P32871]
+
** [http://www.uniprot.org/uniprot/Q9CHD0 Q9CHD0]
−
** [http://www.uniprot.org/uniprot/P42338 P42338]
+
** [http://www.uniprot.org/uniprot/Q9JVD3 Q9JVD3]
−
** [http://www.uniprot.org/uniprot/P42336 P42336]
+
** [http://www.uniprot.org/uniprot/P44441 P44441]
−
** [http://www.uniprot.org/uniprot/P32600 P32600]
+
** [http://www.uniprot.org/uniprot/P0A7Y0 P0A7Y0]
−
** [http://www.uniprot.org/uniprot/P35169 P35169]
+
** [http://www.uniprot.org/uniprot/P09155 P09155]
−
** [http://www.uniprot.org/uniprot/O04269 O04269]
+
** [http://www.uniprot.org/uniprot/Q52698 Q52698]
−
** [http://www.uniprot.org/uniprot/P91634 P91634]
+
** [http://www.uniprot.org/uniprot/Q49034 Q49034]
−
** [http://www.uniprot.org/uniprot/Q92213 Q92213]
+
** [http://www.uniprot.org/uniprot/O69469 O69469]
−
** [http://www.uniprot.org/uniprot/P54673 P54673]
+
{{#set: common-name=ribonuclease iii|endoribonuclease}}
−
** [http://www.uniprot.org/uniprot/P54674 P54674]
+
{{#set: ec-number=ec-3.1.26.3}}
−
** [http://www.uniprot.org/uniprot/P54675 P54675]
 
−
** [http://www.uniprot.org/uniprot/P54677 P54677]
 
−
** [http://www.uniprot.org/uniprot/O35904 O35904]
 
−
** [http://www.uniprot.org/uniprot/P50520 P50520]
 
−
</div>
 
−
{{#set: common-name=phosphatidylinositol 3-kinase}}
 
−
{{#set: ec-number=ec-2.7.1.137}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=16}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction 3.1.26.3-RXN

  • common-name:
    • ribonuclease iii
    • endoribonuclease
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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