Difference between revisions of "ASPARAGINE--TRNA-LIGASE-RXN"

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(Created page with "Category:reaction == Reaction METHYLMALONYL-COA-EPIM-RXN == * direction: ** reversible * ec_number: ** ec-5.1.99.1 == Reaction formula == * 1 METHYL-MALONYL-COA[c] '''...")
(Created page with "Category:reaction == Reaction ASPARAGINE--TRNA-LIGASE-RXN == * common-name: ** asparagine-trna ligase ** asparagine—trna ligase * ec-number: ** [http://enzyme.expasy...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction METHYLMALONYL-COA-EPIM-RXN ==
+
== Reaction ASPARAGINE--TRNA-LIGASE-RXN ==
 +
* common-name:
 +
** asparagine-trna ligase
 +
** asparagine—trna ligase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/6.1.1.22 ec-6.1.1.22]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* ec_number:
 
−
** ec-5.1.99.1
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[METHYL-MALONYL-COA]][c] '''<=>''' 1 [[D-METHYL-MALONYL-COA]][c]
+
* 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_00557]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_00555]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_12590]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_20567]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_00556]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_12591]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
+
* [[TRNA-CHARGING-PWY]], tRNA charging:
−
** '''9''' reactions found over '''18''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
* [[P108-PWY]], pyruvate fermentation to propanoate I:
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5743]], 3-hydroxypropanoate cycle:
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-6728]], methylaspartate cycle:
 
−
** '''12''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 
−
** '''8''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PROPIONMET-PWY]], propanoyl CoA degradation I:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR101657
+
* METANETX-RXN : MNXR115725
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20556 20556]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11181 11181]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02765 R02765]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03648 R03648]
−
{{#set: direction=reversible}}
+
* UNIPROT:
−
{{#set: ec_number=ec-5.1.99.1}}
+
** [http://www.uniprot.org/uniprot/P39772 P39772]
−
{{#set: nb gene associated=0}}
+
** [http://www.uniprot.org/uniprot/O57980 O57980]
−
{{#set: nb pathway associated=6}}
+
** [http://www.uniprot.org/uniprot/Q9V251 Q9V251]
−
{{#set: reconstruction category=manual}}
+
** [http://www.uniprot.org/uniprot/Q9CEK9 Q9CEK9]
−
{{#set: reconstruction tool=curation}}
+
** [http://www.uniprot.org/uniprot/P47359 P47359]
−
{{#set: reconstruction comment=annotation}}
+
** [http://www.uniprot.org/uniprot/O51128 O51128]
−
{{#set: reconstruction source=esub_adding_annot_form}}
+
** [http://www.uniprot.org/uniprot/O83618 O83618]
 +
** [http://www.uniprot.org/uniprot/O58008 O58008]
 +
** [http://www.uniprot.org/uniprot/O96198 O96198]
 +
** [http://www.uniprot.org/uniprot/P54262 P54262]
 +
** [http://www.uniprot.org/uniprot/P75521 P75521]
 +
** [http://www.uniprot.org/uniprot/Q48966 Q48966]
 +
** [http://www.uniprot.org/uniprot/P0A8M0 P0A8M0]
 +
{{#set: common-name=asparagine-trna ligase|asparagine&mdash;trna ligase}}
 +
{{#set: ec-number=ec-6.1.1.22}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=6}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction ASPARAGINE--TRNA-LIGASE-RXN

  • common-name:
    • asparagine-trna ligase
    • asparagine—trna ligase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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