Difference between revisions of "RXN0-5217"

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(Created page with "Category:reaction == Reaction ALANINE--TRNA-LIGASE-RXN == * common-name: ** alanine—trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.7 ec-6.1.1.7] * di...")
(Created page with "Category:reaction == Reaction RXN0-5217 == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1] * direction: ** left-to-right == Reaction formula == * 1 CADAVERI...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction ALANINE--TRNA-LIGASE-RXN ==
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== Reaction RXN0-5217 ==
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* common-name:
 
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** alanine—trna ligase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/6.1.1.7 ec-6.1.1.7]
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** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ALA-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ALA-tRNAs]][c] '''+''' 1 [[PPI]][c]
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* 1 [[CADAVERINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[CPD0-1065]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_12130]]
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* Gene: [[E_subulatus_10709]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[E_subulatus_22872]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_18802]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_20327]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_12129]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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* [[PWY0-1303]], aminopropylcadaverine biosynthesis:
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** '''21''' reactions found over '''21''' reactions in the full pathway
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR95867
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* METANETX-RXN : MNXR115678
 
 
* RHEA:
 
* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12541 12541]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33388 33388]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03038 R03038]
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** [http://www.genome.jp/dbget-bin/www_bget?R08359 R08359]
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* UNIPROT:
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{{#set: ec-number=ec-2.5.1}}
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** [http://www.uniprot.org/uniprot/P56452 P56452]
 
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** [http://www.uniprot.org/uniprot/O27718 O27718]
 
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** [http://www.uniprot.org/uniprot/O34526 O34526]
 
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** [http://www.uniprot.org/uniprot/P47534 P47534]
 
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** [http://www.uniprot.org/uniprot/O58035 O58035]
 
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** [http://www.uniprot.org/uniprot/Q9PI05 Q9PI05]
 
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** [http://www.uniprot.org/uniprot/Q9JTG4 Q9JTG4]
 
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** [http://www.uniprot.org/uniprot/Q57984 Q57984]
 
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** [http://www.uniprot.org/uniprot/O51238 O51238]
 
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** [http://www.uniprot.org/uniprot/Q9CEW0 Q9CEW0]
 
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** [http://www.uniprot.org/uniprot/O83980 O83980]
 
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** [http://www.uniprot.org/uniprot/Q9X1B6 Q9X1B6]
 
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** [http://www.uniprot.org/uniprot/Q9ZJY5 Q9ZJY5]
 
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** [http://www.uniprot.org/uniprot/O67323 O67323]
 
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** [http://www.uniprot.org/uniprot/Q9ZCA4 Q9ZCA4]
 
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** [http://www.uniprot.org/uniprot/Q9Z714 Q9Z714]
 
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** [http://www.uniprot.org/uniprot/P49588 P49588]
 
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** [http://www.uniprot.org/uniprot/P43815 P43815]
 
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** [http://www.uniprot.org/uniprot/P50475 P50475]
 
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** [http://www.uniprot.org/uniprot/P24075 P24075]
 
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** [http://www.uniprot.org/uniprot/P27866 P27866]
 
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** [http://www.uniprot.org/uniprot/P35029 P35029]
 
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** [http://www.uniprot.org/uniprot/P40825 P40825]
 
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** [http://www.uniprot.org/uniprot/P75368 P75368]
 
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** [http://www.uniprot.org/uniprot/Q48976 Q48976]
 
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** [http://www.uniprot.org/uniprot/P00957 P00957]
 
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** [http://www.uniprot.org/uniprot/P21894 P21894]
 
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** [http://www.uniprot.org/uniprot/O50189 O50189]
 
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</div>
 
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{{#set: common-name=alanine&mdash;trna ligase}}
 
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{{#set: ec-number=ec-6.1.1.7}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: nb gene associated=5}}
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{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=ectocarpus_subulatus}}
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{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:41, 17 March 2021

Reaction RXN0-5217

  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1303, aminopropylcadaverine biosynthesis:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95867
  • RHEA:
  • LIGAND-RXN:





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