Difference between revisions of "METHYLENETHFDEHYDROG-NADP-RXN"
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(Created page with "Category:reaction == Reaction RXN-9660 == * common-name: ** trans-δ2-decenoyl-[acp]-reductase ** decanoyl-[acyl-carrier-protein] reductase * ec-number: ** [http://en...") |
(Created page with "Category:reaction == Reaction METHYLENETHFDEHYDROG-NADP-RXN == * common-name: ** methylenetetrahydrofolate dehydrogenase (nadp+) ** methylenetetrahydrofolate dehydrogenase...") |
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(One intermediate revision by the same user not shown) | |||
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction METHYLENETHFDEHYDROG-NADP-RXN == |
* common-name: | * common-name: | ||
− | ** | + | ** methylenetetrahydrofolate dehydrogenase (nadp+) |
− | ** | + | ** methylenetetrahydrofolate dehydrogenase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/1.5.1.5 ec-1.5.1.5] |
* direction: | * direction: | ||
− | ** | + | ** reversible |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[NADPH]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[E_subulatus_01722]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[E_subulatus_01721]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[E_subulatus_20899]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[E_subulatus_08637]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[E_subulatus_08636]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[E_subulatus_18694]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_00189]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[E_subulatus_18693]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_08635]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[E_subulatus_20898]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[1CMET2-PWY]], folate transformations III (E. coli): |
− | ** ''' | + | ** '''9''' reactions found over '''9''' reactions in the full pathway |
+ | * [[PWY-2201]], folate transformations I: | ||
+ | ** '''12''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-3841]], folate transformations II (plants): | ||
+ | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-7909]], formaldehyde oxidation VII (THF pathway): | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5497]], purine nucleobases degradation II (anaerobic): | ||
+ | ** '''10''' reactions found over '''24''' reactions in the full pathway | ||
+ | * [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): | ||
+ | ** '''5''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | * METANETX-RXN : | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: common-name= | + | * METANETX-RXN : MNXR116057 |
− | {{#set: ec-number=ec-1. | + | * RHEA: |
− | {{#set: direction= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22815 22815] |
− | {{#set: nb gene associated= | + | * LIGAND-RXN: |
− | {{#set: nb pathway associated= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01220 R01220] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P09440 P09440] | ||
+ | ** [http://www.uniprot.org/uniprot/P07245 P07245] | ||
+ | ** [http://www.uniprot.org/uniprot/P11586 P11586] | ||
+ | ** [http://www.uniprot.org/uniprot/P44313 P44313] | ||
+ | ** [http://www.uniprot.org/uniprot/P47259 P47259] | ||
+ | ** [http://www.uniprot.org/uniprot/P54382 P54382] | ||
+ | ** [http://www.uniprot.org/uniprot/O67736 O67736] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWI9 Q9JWI9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PP68 Q9PP68] | ||
+ | ** [http://www.uniprot.org/uniprot/P24186 P24186] | ||
+ | ** [http://www.uniprot.org/uniprot/Q60006 Q60006] | ||
+ | ** [http://www.uniprot.org/uniprot/Q27772 Q27772] | ||
+ | ** [http://www.uniprot.org/uniprot/P51696 P51696] | ||
+ | ** [http://www.uniprot.org/uniprot/O65269 O65269] | ||
+ | ** [http://www.uniprot.org/uniprot/O65271 O65271] | ||
+ | ** [http://www.uniprot.org/uniprot/O68031 O68031] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZTV0 Q9ZTV0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X7F6 Q9X7F6] | ||
+ | </div> | ||
+ | {{#set: common-name=methylenetetrahydrofolate dehydrogenase|methylenetetrahydrofolate dehydrogenase (nadp+)}} | ||
+ | {{#set: ec-number=ec-1.5.1.5}} | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: nb gene associated=10}} | ||
+ | {{#set: nb pathway associated=7}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=ectocarpus_subulatus}} | {{#set: reconstruction source=ectocarpus_subulatus}} |
Latest revision as of 19:41, 17 March 2021
Contents
Reaction METHYLENETHFDEHYDROG-NADP-RXN
- common-name:
- methylenetetrahydrofolate dehydrogenase (nadp+)
- methylenetetrahydrofolate dehydrogenase
- ec-number:
- direction:
- reversible
Reaction formula
- 1 METHYLENE-THF-GLU-N[c] + 1 NADP[c] <=> 1 5-10-METHENYL-THF-GLU-N[c] + 1 NADPH[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_01722
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_01721
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_20899
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_08637
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_08636
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_18694
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_00189
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_18693
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_08635
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_20898
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- 1CMET2-PWY, folate transformations III (E. coli):
- 9 reactions found over 9 reactions in the full pathway
- PWY-2201, folate transformations I:
- 12 reactions found over 10 reactions in the full pathway
- PWY-3841, folate transformations II (plants):
- 10 reactions found over 11 reactions in the full pathway
- PWY-7909, formaldehyde oxidation VII (THF pathway):
- 2 reactions found over 4 reactions in the full pathway
- PWY-5497, purine nucleobases degradation II (anaerobic):
- 10 reactions found over 24 reactions in the full pathway
- CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
- 5 reactions found over 10 reactions in the full pathway
- PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate:
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links