Difference between revisions of "GLYCINE--TRNA-LIGASE-RXN"

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(Created page with "Category:reaction == Reaction 2.3.1.155-RXN == * direction: ** left-to-right * ec_number: ** ec-2.3.1.155 == Reaction formula == * 1 3-OXOPALMITOYL-COA[c] '''+''' 1 ...")
 
(Created page with "Category:reaction == Reaction GLYCINE--TRNA-LIGASE-RXN == * common-name: ** glycine-trna ligase ** glycine—trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6...")
 
(3 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.3.1.155-RXN ==
+
== Reaction GLYCINE--TRNA-LIGASE-RXN ==
 +
* common-name:
 +
** glycine-trna ligase
 +
** glycine—trna ligase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/6.1.1.14 ec-6.1.1.14]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec_number:
 
−
** ec-2.3.1.155
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-OXOPALMITOYL-COA]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[TETRADECANOYL-COA]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[GLY]][c] '''+''' 1 [[GLY-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-GLY-tRNAs]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_03226]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[E_subulatus_15126]]
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** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* 1 [[3-OXOPALMITOYL-COA]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[TETRADECANOYL-COA]][c]
+
* [[TRNA-CHARGING-PWY]], tRNA charging:
−
** '''8''' reactions found over '''11''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
** '''8''' reactions found over '''11''' reactions in the full pathway
 
−
** '''8''' reactions found over '''22''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : RHEA
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* ID : 18161
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* METANETX-RXN : MNXR115938
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16014 16014]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03654 R03654]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P41250 P41250]
 +
** [http://www.uniprot.org/uniprot/P54380 P54380]
 +
** [http://www.uniprot.org/uniprot/Q9ZCB1 Q9ZCB1]
 +
** [http://www.uniprot.org/uniprot/P43822 P43822]
 +
** [http://www.uniprot.org/uniprot/P54381 P54381]
 +
** [http://www.uniprot.org/uniprot/O51344 O51344]
 +
** [http://www.uniprot.org/uniprot/Q46371 Q46371]
 +
** [http://www.uniprot.org/uniprot/Q9ZCB0 Q9ZCB0]
 +
** [http://www.uniprot.org/uniprot/Q9WY59 Q9WY59]
 +
** [http://www.uniprot.org/uniprot/P43821 P43821]
 +
** [http://www.uniprot.org/uniprot/O83678 O83678]
 +
** [http://www.uniprot.org/uniprot/Q9WY60 Q9WY60]
 +
** [http://www.uniprot.org/uniprot/Q9PPK3 Q9PPK3]
 +
** [http://www.uniprot.org/uniprot/P56454 P56454]
 +
** [http://www.uniprot.org/uniprot/Q9PN63 Q9PN63]
 +
** [http://www.uniprot.org/uniprot/Q57681 Q57681]
 +
** [http://www.uniprot.org/uniprot/P67029 P67029]
 +
** [http://www.uniprot.org/uniprot/O67081 O67081]
 +
** [http://www.uniprot.org/uniprot/O67898 O67898]
 +
** [http://www.uniprot.org/uniprot/O59235 O59235]
 +
** [http://www.uniprot.org/uniprot/P47493 P47493]
 +
** [http://www.uniprot.org/uniprot/Q9ZKP1 Q9ZKP1]
 +
** [http://www.uniprot.org/uniprot/Q9JW67 Q9JW67]
 +
** [http://www.uniprot.org/uniprot/P56453 P56453]
 +
** [http://www.uniprot.org/uniprot/O27874 O27874]
 +
** [http://www.uniprot.org/uniprot/Q9ZKM9 Q9ZKM9]
 +
** [http://www.uniprot.org/uniprot/Q9CGK0 Q9CGK0]
 +
** [http://www.uniprot.org/uniprot/P38088 P38088]
 +
** [http://www.uniprot.org/uniprot/Q06817 Q06817]
 +
** [http://www.uniprot.org/uniprot/Q51114 Q51114]
 +
** [http://www.uniprot.org/uniprot/P75425 P75425]
 +
** [http://www.uniprot.org/uniprot/Q55716 Q55716]
 +
** [http://www.uniprot.org/uniprot/P00960 P00960]
 +
** [http://www.uniprot.org/uniprot/P00961 P00961]
 +
** [http://www.uniprot.org/uniprot/Q8L785 Q8L785]
 +
</div>
 +
{{#set: common-name=glycine&mdash;trna ligase|glycine-trna ligase}}
 +
{{#set: ec-number=ec-6.1.1.14}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec_number=ec-2.3.1.155}}
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{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=curation}}
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{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction comment=annotation}}
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{{#set: reconstruction source=ectocarpus_subulatus}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
 

Latest revision as of 19:41, 17 March 2021

Reaction GLYCINE--TRNA-LIGASE-RXN

  • common-name:
    • glycine-trna ligase
    • glycine—trna ligase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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