Difference between revisions of "RXN-1106"

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(Created page with "Category:reaction == Reaction RXN-14116 == * common-name: ** l-glutamate γ-semialdehyde dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.88 ec-1.2.1....")
(Created page with "Category:reaction == Reaction RXN-1106 == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.44 ec-1.2.1.44] * direction: ** left-to-right == Reaction formula == * 1 FER...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-14116 ==
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== Reaction RXN-1106 ==
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* common-name:
 
−
** l-glutamate γ-semialdehyde dehydrogenase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/1.2.1.88 ec-1.2.1.88]
+
** [http://enzyme.expasy.org/EC/1.2.1.44 ec-1.2.1.44]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[FERULOYL-COA]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CONIFERYL-ALDEHYDE]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_00116]]
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* Gene: [[E_subulatus_03281]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[E_subulatus_00119]]
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* Gene: [[E_subulatus_14571]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[E_subulatus_00117]]
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* Gene: [[E_subulatus_08480]]
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** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[E_subulatus_00121]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_00118]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_00120]]
 
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** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PROUT-PWY]], L-proline degradation I:
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* [[PWY-361]], phenylpropanoid biosynthesis:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** '''6''' reactions found over '''15''' reactions in the full pathway
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* [[PWY-6853]], ethene biosynthesis II (microbes):
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* [[PWY-6027]], capsiconiate biosynthesis:
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** '''2''' reactions found over '''5''' reactions in the full pathway
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
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* METANETX-RXN : MNXR103352
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* METANETX-RXN : MNXR107366
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00245 R00245]
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** [http://www.genome.jp/dbget-bin/www_bget?R02193 R02193]
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* RHEA:
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{{#set: ec-number=ec-1.2.1.44}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30236 30236]
 
−
{{#set: common-name=l-glutamate γ-semialdehyde dehydrogenase}}
 
−
{{#set: ec-number=ec-1.2.1.88}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:41, 17 March 2021

Reaction RXN-1106

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-361, phenylpropanoid biosynthesis:
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-6027, capsiconiate biosynthesis:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107366
  • LIGAND-RXN:





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