Difference between revisions of "RXN-13615"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction GLUTAMATE-DEHYDROGENASE-NADP+-RXN == * common-name: ** glutamate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.4.1.3 ec-1.4.1....")
(Created page with "Category:reaction == Reaction RXN-13615 == * common-name: ** decanoyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.8.7 ec-1.3.8.7] * direction: ** le...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTAMATE-DEHYDROGENASE-NADP+-RXN ==
+
== Reaction RXN-13615 ==
 
* common-name:
 
* common-name:
−
** glutamate dehydrogenase
+
** decanoyl-coa dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.1.3 ec-1.4.1.3]
+
** [http://enzyme.expasy.org/EC/1.3.8.7 ec-1.3.8.7]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLT]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-10267]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[T2-DECENOYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_17368]]
+
* Gene: [[E_subulatus_21544]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_22259]]
+
* Gene: [[E_subulatus_25109]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_17420]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_23466]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_25108]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_25110]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II:
+
* [[PWY-7094]], fatty acid salvage:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[GLUTAMATE-SYN2-PWY]], L-glutamate biosynthesis II:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5766]], L-glutamate degradation X:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[GLUDEG-I-PWY]], GABA shunt:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR115927
+
* METANETX-RXN : MNXR118204
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P49448 P49448]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28355 28355]
−
** [http://www.uniprot.org/uniprot/P00366 P00366]
+
{{#set: common-name=decanoyl-coa dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/P00368 P00368]
+
{{#set: ec-number=ec-1.3.8.7}}
−
** [http://www.uniprot.org/uniprot/P00367 P00367]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q7LZR0 Q7LZR0]
+
{{#set: nb gene associated=6}}
−
** [http://www.uniprot.org/uniprot/P10860 P10860]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P26443 P26443]
 
−
** [http://www.uniprot.org/uniprot/P80053 P80053]
 
−
** [http://www.uniprot.org/uniprot/Q9UWM2 Q9UWM2]
 
−
** [http://www.uniprot.org/uniprot/P42174 P42174]
 
−
** [http://www.uniprot.org/uniprot/P52596 P52596]
 
−
** [http://www.uniprot.org/uniprot/P96110 P96110]
 
−
{{#set: common-name=glutamate dehydrogenase}}
 
−
{{#set: ec-number=ec-1.4.1.3}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=4}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction RXN-13615

  • common-name:
    • decanoyl-coa dehydrogenase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7094, fatty acid salvage:
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR118204
  • RHEA:





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=RXN-13615&oldid=52233"