Difference between revisions of "RXN0-1461"

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(Created page with "Category:reaction == Reaction ALCOHOL-DEHYDROG-RXN == * direction: ** reversible * ec_number: ** ec-1.1.1.1 == Reaction formula == * 1 ETOH[c] '''+''' 1 NAD[c] '''...")
 
(Created page with "Category:reaction == Reaction RXN0-1461 == * common-name: ** coproporphyrinogen iii oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.3.3 ec-1.3.3.3] * direction: *...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALCOHOL-DEHYDROG-RXN ==
+
== Reaction RXN0-1461 ==
 +
* common-name:
 +
** coproporphyrinogen iii oxidase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.3.3.3 ec-1.3.3.3]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* ec_number:
 
−
** ec-1.1.1.1
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ETOH]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[ACETALD]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROTOPORPHYRINOGEN]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_07854]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_00323]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_00322]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY0-1415]], superpathway of heme b biosynthesis from uroporphyrinogen-III:
 +
** '''5''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[HEME-BIOSYNTHESIS-II]], heme b biosynthesis I (aerobic):
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent):
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent):
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 +
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* 1 [[ETOH]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[ACETALD]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* METANETX-RXN : MNXR96880
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
* RHEA:
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18258 18258]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* LIGAND-RXN:
−
** '''1''' reactions found over '''2''' reactions in the full pathway
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** [http://www.genome.jp/dbget-bin/www_bget?R03220 R03220]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
* UNIPROT:
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/Q9RLE1 Q9RLE1]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/P36552 P36552]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/O25376 O25376]
−
** '''10''' reactions found over '''16''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/P36553 P36553]
−
** '''10''' reactions found over '''16''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/P33771 P33771]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/P43899 P43899]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/O25824 O25824]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/P54304 P54304]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/P11353 P11353]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/Q8X8G8 Q8X8G8]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/Q9ZC86 Q9ZC86]
−
** '''14''' reactions found over '''18''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/P36551 P36551]
−
** '''14''' reactions found over '''18''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/P35055 P35055]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/P43898 P43898]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** [http://www.uniprot.org/uniprot/P72848 P72848]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/P73245 P73245]
 +
** [http://www.uniprot.org/uniprot/P74132 P74132]
 +
** [http://www.uniprot.org/uniprot/Q51676 Q51676]
 +
** [http://www.uniprot.org/uniprot/Q42946 Q42946]
 +
** [http://www.uniprot.org/uniprot/Q42840 Q42840]
 +
** [http://www.uniprot.org/uniprot/Q39581 Q39581]
 +
** [http://www.uniprot.org/uniprot/P95651 P95651]
 +
** [http://www.uniprot.org/uniprot/Q9RFG1 Q9RFG1]
 
</div>
 
</div>
−
== Reconstruction information  ==
+
{{#set: common-name=coproporphyrinogen iii oxidase}}
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
{{#set: ec-number=ec-1.3.3.3}}
−
== External links  ==
+
{{#set: direction=left-to-right}}
−
* DB : RHEA
+
{{#set: nb gene associated=3}}
−
* ID : 25290
+
{{#set: nb pathway associated=4}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: ec_number=ec-1.1.1.1}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: nb gene associated=0}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: nb pathway associated=11}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction tool=curation}}
 
−
{{#set: reconstruction comment=annotation}}
 
−
{{#set: reconstruction source=esub_adding_annot_form}}
 

Latest revision as of 19:41, 17 March 2021

Reaction RXN0-1461

  • common-name:
    • coproporphyrinogen iii oxidase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1415, superpathway of heme b biosynthesis from uroporphyrinogen-III:
    • 5 reactions found over n.a reactions in the full pathway
  • HEME-BIOSYNTHESIS-II, heme b biosynthesis I (aerobic):
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent):
    • 4 reactions found over 9 reactions in the full pathway
  • CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent):
    • 5 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=RXN0-1461&oldid=52301"