Difference between revisions of "O-SUCCHOMOSERLYASE-RXN"

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(Created page with "Category:reaction == Reaction RXN0-1461 == * common-name: ** coproporphyrinogen iii oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.3.3 ec-1.3.3.3] * direction: *...")
(Created page with "Category:reaction == Reaction O-SUCCHOMOSERLYASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48] * direction: ** reversible == Reaction formula =...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN0-1461 ==
+
== Reaction O-SUCCHOMOSERLYASE-RXN ==
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* common-name:
 
−
** coproporphyrinogen iii oxidase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.3.3 ec-1.3.3.3]
+
** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48]
 
* direction:
 
* direction:
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** left-to-right
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** reversible
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROTOPORPHYRINOGEN]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[CYS]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''<=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_00323]]
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* Gene: [[E_subulatus_22240]]
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_00322]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[E_subulatus_07854]]
 
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** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-801]], homocysteine and cysteine interconversion:
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine):
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
* METANETX-RXN : MNXR104380
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* ID : O25824
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* RHEA:
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{{#set: common-name=coproporphyrinogen iii oxidase}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
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{{#set: ec-number=ec-1.3.3.3}}
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* LIGAND-RXN:
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{{#set: direction=left-to-right}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260]
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{{#set: nb gene associated=3}}
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* UNIPROT:
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{{#set: nb pathway associated=4}}
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** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2]
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{{#set: reconstruction category=annotation|orthology}}
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** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6]
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
** [http://www.uniprot.org/uniprot/P38675 P38675]
 +
** [http://www.uniprot.org/uniprot/P24601 P24601]
 +
** [http://www.uniprot.org/uniprot/P00935 P00935]
 +
** [http://www.uniprot.org/uniprot/O04981 O04981]
 +
** [http://www.uniprot.org/uniprot/O04982 O04982]
 +
** [http://www.uniprot.org/uniprot/O81334 O81334]
 +
** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9]
 +
{{#set: ec-number=ec-2.5.1.48}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:41, 17 March 2021

Reaction O-SUCCHOMOSERLYASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-801, homocysteine and cysteine interconversion:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-I9, L-cysteine biosynthesis VI (from L-methionine):
    • 3 reactions found over 5 reactions in the full pathway
  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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