Difference between revisions of "RXN-11474"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-16131 == * direction: ** left-to-right * ec_number: ** ec-1.3.1.93 == Reaction formula == * 1 CPD-17383[c] '''+''' 1 NADPH[c] '''...")
(Created page with "Category:reaction == Reaction RXN-11474 == * common-name: ** 3-oxo-glutaryl-[acp] methyl ester synthase ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [http:...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16131 ==
+
== Reaction RXN-11474 ==
 +
* common-name:
 +
** 3-oxo-glutaryl-[acp] methyl ester synthase
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec_number:
 
−
** ec-1.3.1.93
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-17383]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-17331]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[MALONYL-ACP]][c] '''+''' 1 [[Malonyl-acp-methyl-ester]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-Ketoglutaryl-ACP-methyl-ester]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_22266]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13004]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_22265]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13005]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_13006]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_08948]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals):
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I:
−
** '''14''' reactions found over '''14''' reactions in the full pathway
+
** '''8''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR119876
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10115 R10115]
 +
* METANETX-RXN : MNXR113490
 +
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase|3-oxo-glutaryl-[acp] methyl ester synthase}}
 +
{{#set: ec-number=ec-2.3.1.179|ec-2.3.1.41}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec_number=ec-1.3.1.93}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb gene associated=0}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=annotation}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction RXN-11474

  • common-name:
    • 3-oxo-glutaryl-[acp] methyl ester synthase
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I:
    • 8 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR113490
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxo-glutaryl-[acp] methyl ester synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=RXN-11474&oldid=52333"