Difference between revisions of "RXN-14073"

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(Created page with "Category:reaction == Reaction 2.7.1.160-RXN == * direction: ** left-to-right * ec_number: ** ec-2.7.1.160 == Reaction formula == * 1 2-phospho-ligated-tRNA[c] '''+'''...")
(Created page with "Category:reaction == Reaction RXN-14073 == * common-name: ** glycerophosphodiester phosphodiesterase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4.46] * d...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction 2.7.1.160-RXN ==
+
== Reaction RXN-14073 ==
 +
* common-name:
 +
** glycerophosphodiester phosphodiesterase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4.46]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec_number:
 
−
** ec-2.7.1.160
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[2-phospho-ligated-tRNA]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-9007]][c] '''+''' 1 [[NIACINAMIDE]][c] '''+''' 1 [[Spliced-tRNA-precursor]][c]
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* 1 [[GLYCEROPHOSPHOGLYCEROL]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLYCEROL]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_19388]]
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** Category: [[annotation]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[E_subulatus_19385]]
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** Category: [[annotation]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[E_subulatus_19384]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_19387]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_19386]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6689]], tRNA splicing I:
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR115187
+
* METANETX-RXN : MNXR100413
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23325 23325]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29910 29910]
 +
{{#set: common-name=glycerophosphodiester phosphodiesterase}}
 +
{{#set: ec-number=ec-3.1.4.46}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec_number=ec-2.7.1.160}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=curation}}
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{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction comment=annotation}}
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{{#set: reconstruction source=ectocarpus_subulatus}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
 

Latest revision as of 19:41, 17 March 2021

Reaction RXN-14073

  • common-name:
    • glycerophosphodiester phosphodiesterase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR100413
  • RHEA:





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