Difference between revisions of "UDP-GLUCURONATE-DECARBOXYLASE-RXN"

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(Created page with "Category:reaction == Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN == * common-name: ** gdp-mannose 6-dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.132 ec-1....")
(Created page with "Category:reaction == Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN == * common-name: ** udp-xylose synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.35 ec-4.1.1.35]...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN ==
+
== Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN ==
 
* common-name:
 
* common-name:
** gdp-mannose 6-dehydrogenase
+
** udp-xylose synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.1.132 ec-1.1.1.132]
+
** [http://enzyme.expasy.org/EC/4.1.1.35 ec-4.1.1.35]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GDP-MANNOSE]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1828]][c] '''+''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c]
+
* 1 [[PROTON]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[UDP-D-XYLOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_24910]]
+
* Gene: [[E_subulatus_21311]]
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_19638]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_19639]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_15827]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_15828]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-4821]], UDP-α-D-xylose biosynthesis:
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''1''' reactions in the full pathway
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* DB : RHEA
+
* METANETX-RXN : MNXR105068
* ID : 21731
+
* RHEA:
{{#set: common-name=gdp-mannose 6-dehydrogenase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23917 23917]
{{#set: ec-number=ec-1.1.1.132}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01384 R01384]
 +
{{#set: common-name=udp-xylose synthase}}
 +
{{#set: ec-number=ec-4.1.1.35}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN

  • common-name:
    • udp-xylose synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4821, UDP-α-D-xylose biosynthesis:
    • 2 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR105068
  • RHEA:
  • LIGAND-RXN: