Difference between revisions of "UDP-GLUCURONATE-DECARBOXYLASE-RXN"

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(Created page with "Category:reaction == Reaction GALACTOKIN-RXN == * common-name: ** galactokinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6] * direction: ** reversible...")
(Created page with "Category:reaction == Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN == * common-name: ** udp-xylose synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.35 ec-4.1.1.35]...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GALACTOKIN-RXN ==
+
== Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN ==
 
* common-name:
 
* common-name:
−
** galactokinase
+
** udp-xylose synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6]
+
** [http://enzyme.expasy.org/EC/4.1.1.35 ec-4.1.1.35]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GALACTOSE-1P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[PROTON]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[UDP-D-XYLOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_15511]]
+
* Gene: [[E_subulatus_21311]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_11918]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3821]], D-galactose detoxification:
+
* [[PWY-4821]], UDP-&alpha;-D-xylose biosynthesis:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY66-422]]:
 
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
 
−
* [[PWY-6317]], D-galactose degradation I (Leloir pathway):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6527]], stachyose degradation:
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR99985
+
* METANETX-RXN : MNXR105068
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13556 13556]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23917 23917]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01092 R01092]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01384 R01384]
−
* UNIPROT:
+
{{#set: common-name=udp-xylose synthase}}
−
** [http://www.uniprot.org/uniprot/P09608 P09608]
+
{{#set: ec-number=ec-4.1.1.35}}
−
** [http://www.uniprot.org/uniprot/Q01415 Q01415]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P22713 P22713]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P31767 P31767]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q8X7P4 Q8X7P4]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q9R7D7 Q9R7D7]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P96993 P96993]
 
−
** [http://www.uniprot.org/uniprot/P04385 P04385]
 
−
** [http://www.uniprot.org/uniprot/P0A6T3 P0A6T3]
 
−
** [http://www.uniprot.org/uniprot/P13227 P13227]
 
−
** [http://www.uniprot.org/uniprot/P39574 P39574]
 
−
** [http://www.uniprot.org/uniprot/P13045 P13045]
 
−
** [http://www.uniprot.org/uniprot/Q9SEE5 Q9SEE5]
 
−
{{#set: common-name=galactokinase}}
 
−
{{#set: ec-number=ec-2.7.1.6}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN

  • common-name:
    • udp-xylose synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4821, UDP-α-D-xylose biosynthesis:
    • 2 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR105068
  • RHEA:
  • LIGAND-RXN:





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